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CHRNA1 cholinergic receptor nicotinic alpha 1 subunit [ Equus caballus (horse) ]

Gene ID: 100065034, updated on 18-Dec-2024

Summary

Official Symbol
CHRNA1provided by VGNC
Official Full Name
cholinergic receptor nicotinic alpha 1 subunitprovided by VGNC
Primary source
VGNC:VGNC:16522
See related
Ensembl:ENSECAG00000019649
Gene type
protein coding
RefSeq status
MODEL
Organism
Equus caballus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Perissodactyla; Equidae; Equus
Orthologs
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Genomic context

See CHRNA1 in Genome Data Viewer
Location:
chromosome: 18
Exon count:
9
Annotation release Status Assembly Chr Location
RS_2024_12 current TB-T2T (GCF_041296265.1) 18 NC_091701.1 (54169442..54186563, complement)
RS_2024_08 previous assembly EquCab3.0 (GCF_002863925.1) 18 NC_009161.3 (53487955..53504983, complement)

Chromosome 18 - NC_091701.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC106781953 Neighboring gene WAS/WASL interacting protein family member 1 Neighboring gene NF-kappa-B inhibitor beta-like Neighboring gene chimerin 1 Neighboring gene uncharacterized LOC138918668 Neighboring gene uncharacterized LOC138918667

Genomic regions, transcripts, and products

Expression

  • Project title: Thoroughbred Stallion gene expression
  • BioProject: PRJEB53382
  • Analysis date: Mon Jan 06 09:53:19 2025

General gene information

Gene Ontology Provided by RefSeq

Component Evidence Code Pubs
located_in neuron projection PubMed 
located_in plasma membrane PubMed 
located_in postsynaptic membrane PubMed 
located_in synapse PubMed 

General protein information

Preferred Names
acetylcholine receptor subunit alpha
Names
cholinergic receptor, nicotinic, alpha 1 (muscle)

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_041296265.1-RS_2024_12

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference TB-T2T Primary Assembly

Genomic

  1. NC_091701.1 Reference TB-T2T Primary Assembly

    Range
    54169442..54186563 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_001499557.7XP_001499607.1  acetylcholine receptor subunit alpha

    UniProtKB/TrEMBL
    A0A5F5PFW4, F7E1H9
    Related
    ENSECAP00000017363.1
    Conserved Domains (3) summary
    TIGR00860
    Location:21447
    LIC; Cation transporter family protein
    pfam02931
    Location:24231
    Neur_chan_LBD; Neurotransmitter-gated ion-channel ligand binding domain
    pfam02932
    Location:238446
    Neur_chan_memb; Neurotransmitter-gated ion-channel transmembrane region
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