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SLC13A1 solute carrier family 13 member 1 [ Pongo abelii (Sumatran orangutan) ]

Gene ID: 100173390, updated on 3-Dec-2024

Summary

Gene symbol
SLC13A1
Gene description
solute carrier family 13 member 1
Locus tag
CR201_G0030478
See related
Ensembl:ENSPPYG00000017954
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Pongo abelii
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Pongo
Also known as
DKFZP469N2120
Orthologs
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Genomic context

See SLC13A1 in Genome Data Viewer
Location:
chromosome: 6
Exon count:
18
Annotation release Status Assembly Chr Location
RS_2024_02 current NHGRI_mPonAbe1-v2.0_pri (GCF_028885655.2) 6 NC_071991.2 (120432616..120518422, complement)
RS_2023_04 previous assembly NHGRI_mPonAbe1-v1.1-hic.freeze_pri (GCF_028885655.1) 7 NC_071992.1 (114255169..114340975, complement)

Chromosome 6 - NC_071991.2Genomic Context describing neighboring genes Neighboring gene calcium dependent secretion activator 2 Neighboring gene transcription factor p65-like Neighboring gene uncharacterized LOC129060464 Neighboring gene taste 2 receptor member 16 Neighboring gene uncharacterized LOC129060465 Neighboring gene acyl-protein thioesterase 1-like Neighboring gene U6 spliceosomal RNA Neighboring gene IQ motif and ubiquitin domain containing

Genomic regions, transcripts, and products

General gene information

Clone Names

  • DKFZp469I0719

Gene Ontology Provided by RefSeq

Component Evidence Code Pubs
located_in membrane PubMed 

General protein information

Preferred Names
solute carrier family 13 member 1
Names
solute carrier family 13 (sodium/sulfate symporters), member 1

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001132935.3NP_001126407.2  solute carrier family 13 member 1 isoform 2

    Status: VALIDATED

    Source sequence(s)
    JAQQLQ020000006
    UniProtKB/TrEMBL
    A0A8I5YV17
    Related
    ENSPPYP00000044173.1, ENSPPYT00000058047.1
  2. NM_001135413.2NP_001128885.2  solute carrier family 13 member 1 isoform 1

    Status: VALIDATED

    Source sequence(s)
    JAQQLQ020000006
    UniProtKB/TrEMBL
    Q5R5H6

RefSeqs of Annotated Genomes: GCF_028885655.2-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference NHGRI_mPonAbe1-v2.0_pri Primary Assembly

Genomic

  1. NC_071991.2 Reference NHGRI_mPonAbe1-v2.0_pri Primary Assembly

    Range
    120432616..120518422 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_024249322.2XP_024105090.2  solute carrier family 13 member 1 isoform X1

  2. XM_024249321.2XP_024105089.2  solute carrier family 13 member 1 isoform X2

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