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YARS1 tyrosyl-tRNA synthetase 1 [ Oryctolagus cuniculus (rabbit) ]

Gene ID: 100353312, updated on 2-Dec-2024

Summary

Gene symbol
YARS1
Gene description
tyrosyl-tRNA synthetase 1
See related
Ensembl:ENSOCUG00000010007
Gene type
protein coding
RefSeq status
MODEL
Organism
Oryctolagus cuniculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Lagomorpha; Leporidae; Oryctolagus
Also known as
YARS
Orthologs
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Genomic context

See YARS1 in Genome Data Viewer
Location:
chromosome: 7
Exon count:
14
Annotation release Status Assembly Chr Location
RS_2024_11 current mOryCun1.1 (GCF_964237555.1) 7 NC_091438.1 (139745271..139775053)
RS_2023_02 previous assembly UM_NZW_1.0 (GCF_009806435.1) Unplaced Scaffold NW_026259156.1 (1211697..1239436, complement)

Chromosome 7 - NC_091438.1Genomic Context describing neighboring genes Neighboring gene ring finger protein 19B Neighboring gene transmembrane protein 54 Neighboring gene hippocalcin Neighboring gene fibronectin type III domain containing 5 Neighboring gene S100P binding protein Neighboring gene NHS like 3 Neighboring gene uncharacterized LOC138850688 Neighboring gene syncoilin, intermediate filament protein

Genomic regions, transcripts, and products

General gene information

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATP binding PubMed 
enables tRNA binding PubMed 
enables tyrosine-tRNA ligase activity PubMed 

General protein information

Preferred Names
tyrosine--tRNA ligase, cytoplasmic

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_964237555.1-RS_2024_11

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mOryCun1.1

Genomic

  1. NC_091438.1 Reference mOryCun1.1

    Range
    139745271..139775053
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_070078808.1XP_069934909.1  tyrosine--tRNA ligase, cytoplasmic isoform X2

  2. XM_002720707.5XP_002720753.1  tyrosine--tRNA ligase, cytoplasmic isoform X1

    UniProtKB/TrEMBL
    G1SYD3
    Related
    ENSOCUP00000008622.2
    Conserved Domains (3) summary
    COG0162
    Location:9374
    TyrS; Tyrosyl-tRNA synthetase [Translation, ribosomal structure and biogenesis]
    cd02799
    Location:363468
    tRNA_bind_EMAP-II_like; tRNA-binding-domain-containing EMAP2-like proteins. This family contains a diverse fraction of tRNA binding proteins, including Caenorhabditis elegans methionyl-tRNA synthetase (CeMetRS), human tyrosyl- tRNA synthetase (hTyrRS), Saccharomyces cerevisiae ...
    cl00015
    Location:8337
    nt_trans; nucleotidyl transferase superfamily

RNA

  1. XR_001795551.3 RNA Sequence

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