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tcf4 transcription factor 4 [ Anolis carolinensis (green anole) ]

Gene ID: 100557374, updated on 3-Dec-2024

Summary

Gene symbol
tcf4
Gene description
transcription factor 4
See related
Ensembl:ENSACAG00000008863
Gene type
protein coding
RefSeq status
MODEL
Organism
Anolis carolinensis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Lepidosauria; Squamata; Bifurcata; Unidentata; Episquamata; Toxicofera; Iguania; Dactyloidae; Anolis
Orthologs
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Genomic context

See tcf4 in Genome Data Viewer
Location:
chromosome: 2
Exon count:
29
Annotation release Status Assembly Chr Location
RS_2024_02 current rAnoCar3.1.pri (GCF_035594765.1) 2 NC_085842.1 (308252628..308631036)
102 previous assembly AnoCar2.0 (GCF_000090745.1) Unplaced Scaffold NW_003338760.1 (524192..986735, complement)

Chromosome 2 - NC_085842.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC107983123 Neighboring gene uncharacterized LOC134295873 Neighboring gene uncharacterized LOC134297155 Neighboring gene uncharacterized LOC134297156 Neighboring gene coiled-coil domain containing 68

Genomic regions, transcripts, and products

General gene information

Gene Ontology Provided by RefSeq

Component Evidence Code Pubs
part_of chromatin PubMed 
part_of transcription regulator complex PubMed 

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_035594765.1-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference rAnoCar3.1.pri

Genomic

  1. NC_085842.1 Reference rAnoCar3.1.pri

    Range
    308252628..308631036
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_062974260.1XP_062830330.1  transcription factor 4 isoform X1

    UniProtKB/TrEMBL
    A0A803SXY7
  2. XM_062974264.1XP_062830334.1  transcription factor 4 isoform X12

    UniProtKB/TrEMBL
    A0A803SXY7
  3. XM_062974263.1XP_062830333.1  transcription factor 4 isoform X11

    UniProtKB/TrEMBL
    A0A803SXY7
  4. XM_062974268.1XP_062830338.1  transcription factor 4 isoform X1

    UniProtKB/TrEMBL
    A0A803SXY7
  5. XM_008115118.3XP_008113325.1  transcription factor 4 isoform X6

    UniProtKB/TrEMBL
    A0A803SXY7
    Related
    ENSACAP00000027827.1
    Conserved Domains (1) summary
    smart00353
    Location:602655
    HLH; helix loop helix domain
  6. XM_062974266.1XP_062830336.1  transcription factor 4 isoform X12

    UniProtKB/TrEMBL
    A0A803SXY7
  7. XM_062974253.1XP_062830323.1  transcription factor 4 isoform X1

    UniProtKB/TrEMBL
    A0A803SXY7
  8. XM_062974255.1XP_062830325.1  transcription factor 4 isoform X3

    UniProtKB/TrEMBL
    A0A803SXY7
  9. XM_062974258.1XP_062830328.1  transcription factor 4 isoform X5

    UniProtKB/TrEMBL
    A0A803SXY7
  10. XM_062974254.1XP_062830324.1  transcription factor 4 isoform X2

    UniProtKB/TrEMBL
    A0A803SXY7
  11. XM_062974257.1XP_062830327.1  transcription factor 4 isoform X4

    UniProtKB/TrEMBL
    A0A803SXY7
  12. XM_062974259.1XP_062830329.1  transcription factor 4 isoform X7

    UniProtKB/TrEMBL
    A0A803T1Y5
  13. XM_062974261.1XP_062830331.1  transcription factor 4 isoform X8

    UniProtKB/TrEMBL
    A0A803SXY7
  14. XM_008115119.3XP_008113326.2  transcription factor 4 isoform X9

    UniProtKB/TrEMBL
    A0A803SXY7
  15. XM_062974267.1XP_062830337.1  transcription factor 4 isoform X12

    UniProtKB/TrEMBL
    A0A803SXY7
  16. XM_062974262.1XP_062830332.1  transcription factor 4 isoform X10

    UniProtKB/TrEMBL
    A0A803SXY7
  17. XM_062974276.1XP_062830346.1  transcription factor 4 isoform X21

    UniProtKB/TrEMBL
    A0A803SXY7
  18. XM_062974272.1XP_062830342.1  transcription factor 4 isoform X16

    UniProtKB/TrEMBL
    A0A803T1F7
  19. XM_062974269.1XP_062830339.1  transcription factor 4 isoform X13

    UniProtKB/TrEMBL
    H9GES4
  20. XM_062974270.1XP_062830340.1  transcription factor 4 isoform X14

    UniProtKB/TrEMBL
    A0A803T1F7
  21. XM_062974271.1XP_062830341.1  transcription factor 4 isoform X15

    UniProtKB/TrEMBL
    A0A803T1F7
  22. XM_016995241.2XP_016850730.1  transcription factor 4 isoform X17

    UniProtKB/TrEMBL
    A0A803T1F7
  23. XM_008115120.3XP_008113327.1  transcription factor 4 isoform X19

    UniProtKB/TrEMBL
    A0A803SNB0, A0A803T1F7
    Related
    ENSACAP00000024450.1
    Conserved Domains (1) summary
    smart00353
    Location:411464
    HLH; helix loop helix domain
  24. XM_062974273.1XP_062830343.1  transcription factor 4 isoform X18

    UniProtKB/TrEMBL
    A0A803T1F7
  25. XM_062974275.1XP_062830345.1  transcription factor 4 isoform X20

    UniProtKB/TrEMBL
    A0A803T1F7

RNA

  1. XR_010003930.1 RNA Sequence

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