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LGI2 leucine rich repeat LGI family member 2 [ Pan paniscus (pygmy chimpanzee) ]

Gene ID: 100967847, updated on 8-Mar-2024

Summary

Gene symbol
LGI2
Gene description
leucine rich repeat LGI family member 2
See related
Ensembl:ENSPPAG00000043039
Gene type
protein coding
RefSeq status
MODEL
Organism
Pan paniscus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Pan
Orthologs
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Genomic context

See LGI2 in Genome Data Viewer
Location:
chromosome: 3
Exon count:
8
Annotation release Status Assembly Chr Location
RS_2024_02 current NHGRI_mPanPan1-v2.0_pri (GCF_029289425.2) 3 NC_073252.2 (25249838..25279005, complement)
RS_2023_05 previous assembly NHGRI_mPanPan1-v1.1-0.1.freeze_pri (GCF_029289425.1) 4 NC_073253.1 (25443540..25472696, complement)

Chromosome 3 - NC_073252.2Genomic Context describing neighboring genes Neighboring gene coiled-coil domain containing 149 Neighboring gene uncharacterized LOC117979931 Neighboring gene Sep (O-phosphoserine) tRNA:Sec (selenocysteine) tRNA synthase Neighboring gene uncharacterized LOC112439577

Genomic regions, transcripts, and products

General gene information

Gene Ontology Provided by RefSeq

Component Evidence Code Pubs
located_in extracellular space PubMed 

General protein information

Preferred Names
leucine-rich repeat LGI family member 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_029289425.2-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference NHGRI_mPanPan1-v2.0_pri Primary Assembly

Genomic

  1. NC_073252.2 Reference NHGRI_mPanPan1-v2.0_pri Primary Assembly

    Range
    25249838..25279005 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_003826908.6XP_003826956.3  leucine-rich repeat LGI family member 2

    UniProtKB/TrEMBL
    A0A2R9CQ93
    Conserved Domains (4) summary
    TIGR00864
    Location:140215
    PCC; polycystin cation channel protein
    sd00031
    Location:111134
    LRR_1; leucine-rich repeat [structural motif]
    pfam03736
    Location:266304
    EPTP; EPTP domain
    pfam13855
    Location:110169
    LRR_8; Leucine rich repeat
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