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spg7 SPG7 matrix AAA peptidase subunit, paraplegin [ Takifugu rubripes (torafugu) ]

Gene ID: 101063810, updated on 8-Mar-2024

Summary

Gene symbol
spg7
Gene description
SPG7 matrix AAA peptidase subunit, paraplegin
See related
Ensembl:ENSTRUG00000017255
Gene type
protein coding
RefSeq status
MODEL
Organism
Takifugu rubripes
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Eupercaria; Tetraodontiformes; Tetradontoidea; Tetraodontidae; Takifugu
Orthologs
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Genomic context

See spg7 in Genome Data Viewer
Location:
chromosome: 13
Exon count:
17
Annotation release Status Assembly Chr Location
103 current fTakRub1.2 (GCF_901000725.2) 13 NC_042297.1 (17387110..17392085, complement)
101 previous assembly FUGU5 (GCF_000180615.1) 13 NC_018902.1 (13605232..13610219, complement)

Chromosome 13 - NC_042297.1Genomic Context describing neighboring genes Neighboring gene acyl-CoA synthetase family member 3 Neighboring gene cadherin 15, type 1, M-cadherin (myotubule) Neighboring gene ankyrin repeat domain 11 Neighboring gene solute carrier family 22 member 31 Neighboring gene dipeptidase 1

Genomic regions, transcripts, and products

General gene information

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATP binding PubMed 
enables ATP hydrolysis activity PubMed 
enables ATP-dependent peptidase activity PubMed 
enables metalloendopeptidase activity PubMed 
enables zinc ion binding PubMed 
Component Evidence Code Pubs
part_of m-AAA complex PubMed 
located_in membrane PubMed 

General protein information

Preferred Names
paraplegin
Names
SPG7, paraplegin matrix AAA peptidase subunit

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Takifugu rubripes Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference fTakRub1.2 Primary Assembly

Genomic

  1. NC_042297.1 Reference fTakRub1.2 Primary Assembly

    Range
    17387110..17392085 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_003969922.3XP_003969971.2  paraplegin

    UniProtKB/TrEMBL
    A0A674P7F6, H2V4S3
    Related
    ENSTRUP00000044207.2, ENSTRUT00000044355.3
    Conserved Domains (2) summary
    TIGR01241
    Location:279760
    FtsH_fam; ATP-dependent metalloprotease FtsH
    pfam06480
    Location:158255
    FtsH_ext; FtsH Extracellular
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