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itm2b integral membrane protein 2B [ Takifugu rubripes (torafugu) ]

Gene ID: 101074381, updated on 21-Dec-2023

Summary

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Gene symbol
itm2b
Gene description
integral membrane protein 2B
See related
Ensembl:ENSTRUG00000013964
Gene type
protein coding
RefSeq status
MODEL
Organism
Takifugu rubripes
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Eupercaria; Tetraodontiformes; Tetradontoidea; Tetraodontidae; Takifugu
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Genomic context

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See itm2b in Genome Data Viewer
Location:
chromosome: 1
Exon count:
7
Annotation release Status Assembly Chr Location
103 current fTakRub1.2 (GCF_901000725.2) 1 NC_042285.1 (29122180..29124670, complement)
101 previous assembly FUGU5 (GCF_000180615.1) Unplaced Scaffold NW_004071335.1 (30474..32909, complement)

Chromosome 1 - NC_042285.1Genomic Context describing neighboring genes Neighboring gene CCR4-NOT transcription complex, subunit 11 Neighboring gene lymphocyte cytosolic protein 1 (L-plastin) Neighboring gene mediator complex subunit 4 Neighboring gene succinate-CoA ligase ADP-forming subunit beta

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

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General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables amyloid-beta binding PubMed 
Process Evidence Code Pubs
involved_in negative regulation of amyloid precursor protein biosynthetic process PubMed 
Component Evidence Code Pubs
located_in Golgi apparatus PubMed 
located_in extracellular exosome PubMed 
located_in plasma membrane PubMed 

General protein information

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Preferred Names
integral membrane protein 2B

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Takifugu rubripes Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference fTakRub1.2 Primary Assembly

Genomic

  1. NC_042285.1 Reference fTakRub1.2 Primary Assembly

    Range
    29122180..29124670 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_003976684.3 → XP_003976733.1  integral membrane protein 2B

    UniProtKB/TrEMBL
    H2UFI1
    Related
    ENSTRUP00000035701.2, ENSTRUT00000035829.3
    Conserved Domains (1) summary
    smart01039
    Location:127 → 221
    BRICHOS; The BRICHOS domain is found in a variety of proteins implicated in dementia, respiratory distress and cancer

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