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Galnt13 polypeptide N-acetylgalactosaminyltransferase 13 [ Octodon degus (degu) ]

Gene ID: 101564157, updated on 8-Mar-2024

Summary

Gene symbol
Galnt13
Gene description
polypeptide N-acetylgalactosaminyltransferase 13
See related
Ensembl:ENSODEG00000004968
Gene type
protein coding
RefSeq status
MODEL
Organism
Octodon degus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Hystricomorpha; Octodontidae; Octodon
Orthologs
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Genomic context

See Galnt13 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
12
Annotation release Status Assembly Chr Location
102 current OctDeg1.0 (GCF_000260255.1) Unplaced Scaffold NW_004524606.1 (1395129..1904527)

NW_004524606.1Genomic Context describing neighboring genes Neighboring gene U6 spliceosomal RNA Neighboring gene disks large-associated protein 5-like Neighboring gene U6 spliceosomal RNA Neighboring gene elongation factor 1-alpha 1 pseudogene Neighboring gene 60S ribosomal protein L35 pseudogene

Genomic regions, transcripts, and products

Genomic Sequence:
NW_004524606 Unplaced Scaffold Reference OctDeg1.0 Primary Assembly

General gene information

Gene Ontology Provided by RefSeq

Component Evidence Code Pubs
located_in Golgi apparatus PubMed 

General protein information

Preferred Names
polypeptide N-acetylgalactosaminyltransferase 13
Names
UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 13 (GalNAc-T13)

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Octodon degus Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference OctDeg1.0 Primary Assembly

Genomic

  1. NW_004524606.1 Reference OctDeg1.0 Primary Assembly

    Range
    1395129..1904527
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_023713326.1XP_023569094.1  polypeptide N-acetylgalactosaminyltransferase 13 isoform X2

    UniProtKB/TrEMBL
    A0A6P6E9S1
    Related
    ENSODEP00000006647.1, ENSODET00000006752.1
    Conserved Domains (2) summary
    cd02510
    Location:118418
    pp-GalNAc-T; pp-GalNAc-T initiates the formation of mucin-type O-linked glycans
    pfam00652
    Location:431547
    Ricin_B_lectin; Ricin-type beta-trefoil lectin domain
  2. XM_023713325.1XP_023569093.1  polypeptide N-acetylgalactosaminyltransferase 13 isoform X1

    UniProtKB/TrEMBL
    A0A6P6EAL9
    Conserved Domains (2) summary
    cd02510
    Location:118418
    pp-GalNAc-T; pp-GalNAc-T initiates the formation of mucin-type O-linked glycans
    pfam00652
    Location:431548
    Ricin_B_lectin; Ricin-type beta-trefoil lectin domain
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