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Amigo3 adhesion molecule with Ig like domain 3 [ Octodon degus (degu) ]

Gene ID: 101577764, updated on 8-Mar-2024

Summary

Gene symbol
Amigo3
Gene description
adhesion molecule with Ig like domain 3
See related
Ensembl:ENSODEG00000020542
Gene type
protein coding
RefSeq status
MODEL
Organism
Octodon degus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Hystricomorpha; Octodontidae; Octodon
Orthologs
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Genomic context

See Amigo3 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
1
Annotation release Status Assembly Chr Location
102 current OctDeg1.0 (GCF_000260255.1) Unplaced Scaffold NW_004524584.1 (15037994..15041308, complement)

NW_004524584.1Genomic Context describing neighboring genes Neighboring gene acylaminoacyl-peptide hydrolase Neighboring gene macrophage stimulating 1 Neighboring gene ring finger protein 123 Neighboring gene uncharacterized LOC111813919 Neighboring gene GDP-mannose pyrophosphorylase B Neighboring gene inositol hexakisphosphate kinase 1

Genomic regions, transcripts, and products

Genomic Sequence:
NW_004524584 Unplaced Scaffold Reference OctDeg1.0 Primary Assembly

General gene information

Gene Ontology Provided by RefSeq

General protein information

Preferred Names
amphoterin-induced protein 3

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Octodon degus Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference OctDeg1.0 Primary Assembly

Genomic

  1. NW_004524584.1 Reference OctDeg1.0 Primary Assembly

    Range
    15037994..15041308 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_004625103.2XP_004625160.1  amphoterin-induced protein 3

    UniProtKB/TrEMBL
    A0A6P3ESV3
    Related
    ENSODEP00000027026.1, ENSODET00000027607.1
    Conserved Domains (5) summary
    cd00096
    Location:296366
    Ig; Immunoglobulin domain
    smart00410
    Location:286371
    IG_like; Immunoglobulin like
    cd00116
    Location:60221
    LRR_RI; Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond ...
    sd00033
    Location:4562
    LRR_RI; leucine-rich repeat [structural motif]
    pfam13855
    Location:85145
    LRR_8; Leucine rich repeat
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