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SEMA6C semaphorin 6C [ Mustela putorius furo (domestic ferret) ]

Gene ID: 101675907, updated on 8-Mar-2024

Summary

Gene symbol
SEMA6C
Gene description
semaphorin 6C
See related
Ensembl:ENSMPUG00000004065
Gene type
protein coding
RefSeq status
MODEL
Organism
Mustela putorius furo (sub-species: furo)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Musteloidea; Mustelidae; Mustelinae; Mustela
Orthologs
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Genomic context

See SEMA6C in Genome Data Viewer
Location:
chromosome: Un
Exon count:
21
Annotation release Status Assembly Chr Location
102 current ASM1176430v1.1 (GCF_011764305.1) Unplaced Scaffold NW_025421447.1 (2643203..2656314)
101 previous assembly MusPutFur1.0 (GCF_000215625.1) Unplaced Scaffold NW_004569378.1 (1109083..1122204)

NW_025421447.1Genomic Context describing neighboring genes Neighboring gene sodium channel modifier 1 Neighboring gene LysM domain containing 1 Neighboring gene TNF alpha induced protein 8 like 2 Neighboring gene GA binding protein transcription factor subunit beta 2 Neighboring gene MLLT11 transcription factor 7 cofactor Neighboring gene CDC42 small effector 1

Genomic regions, transcripts, and products

General gene information

Gene Ontology Provided by RefSeq

Component Evidence Code Pubs
located_in extracellular space PubMed 

General protein information

Preferred Names
semaphorin-6C
Names
sema domain, transmembrane domain , and cytoplasmic domain, 6C
sema domain, transmembrane domain, and cytoplasmic domain, 6C

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Mustela putorius furo Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM1176430v1.1 Primary Assembly

Genomic

  1. NW_025421447.1 Reference ASM1176430v1.1 Primary Assembly

    Range
    2643203..2656314
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_013048010.2XP_012903464.1  semaphorin-6C isoform X3

    UniProtKB/TrEMBL
    A0A8U0TAI1
    Conserved Domains (2) summary
    pfam01437
    Location:485537
    PSI; Plexin repeat
    cl15693
    Location:54484
    Sema; The Sema domain, a protein interacting module, of semaphorins and plexins
  2. XM_013048008.2XP_012903462.1  semaphorin-6C isoform X1

    See identical proteins and their annotated locations for XP_012903462.1

    UniProtKB/TrEMBL
    A0A8U0ND82
    Conserved Domains (2) summary
    pfam01437
    Location:519571
    PSI; Plexin repeat
    cl15693
    Location:54518
    Sema; The Sema domain, a protein interacting module, of semaphorins and plexins
  3. XM_004776754.3XP_004776811.1  semaphorin-6C isoform X1

    See identical proteins and their annotated locations for XP_004776811.1

    UniProtKB/TrEMBL
    A0A8U0ND82
    Conserved Domains (2) summary
    pfam01437
    Location:519571
    PSI; Plexin repeat
    cl15693
    Location:54518
    Sema; The Sema domain, a protein interacting module, of semaphorins and plexins
  4. XM_004776757.3XP_004776814.1  semaphorin-6C isoform X2

    UniProtKB/TrEMBL
    M3XY80
    Related
    ENSMPUP00000004031.1
    Conserved Domains (2) summary
    pfam01437
    Location:519571
    PSI; Plexin repeat
    cl15693
    Location:54518
    Sema; The Sema domain, a protein interacting module, of semaphorins and plexins
  5. XM_004776759.3XP_004776816.1  semaphorin-6C isoform X4

    UniProtKB/TrEMBL
    A0A8U0ND51
    Conserved Domains (2) summary
    pfam01437
    Location:519571
    PSI; Plexin repeat
    cl15693
    Location:54518
    Sema; The Sema domain, a protein interacting module, of semaphorins and plexins
  6. XM_013048009.2XP_012903463.1  semaphorin-6C isoform X1

    See identical proteins and their annotated locations for XP_012903463.1

    UniProtKB/TrEMBL
    A0A8U0ND82
    Conserved Domains (2) summary
    pfam01437
    Location:519571
    PSI; Plexin repeat
    cl15693
    Location:54518
    Sema; The Sema domain, a protein interacting module, of semaphorins and plexins
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