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Dst dystonin [ Heterocephalus glaber (naked mole-rat) ]

Gene ID: 101717284, updated on 3-Dec-2024

Summary

Gene symbol
Dst
Gene description
dystonin
Locus tag
GW7_00799
Gene type
protein coding
RefSeq status
MODEL
Organism
Heterocephalus glaber
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Hystricomorpha; Bathyergidae; Heterocephalus
Orthologs
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Genomic context

See Dst in Genome Data Viewer
Location:
chromosome: Un
Exon count:
100
Annotation release Status Assembly Chr Location
102 current HetGla_female_1.0 (GCF_000247695.1) Unplaced Scaffold NW_004624753.1 (18321591..18778090, complement)

NW_004624753.1Genomic Context describing neighboring genes Neighboring gene DNA damage-regulated autophagy modulator protein 2 pseudogene Neighboring gene zinc finger protein 367 Neighboring gene solute carrier family 35 member D2 Neighboring gene protein archease pseudogene Neighboring gene desmoplakin-like Neighboring gene U6 snRNA-associated Sm-like protein LSm5 pseudogene Neighboring gene cell division cycle-associated protein 3 pseudogene Neighboring gene protein FAM177A1 pseudogene Neighboring gene BEN domain containing 6 Neighboring gene zinc finger protein 451

Genomic regions, transcripts, and products

Genomic Sequence:
NW_004624753 Unplaced Scaffold Reference HetGla_female_1.0 Primary Assembly

General gene information

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables calcium ion binding PubMed 
enables microtubule binding PubMed 
enables structural molecule activity PubMed 
Component Evidence Code Pubs
located_in cytoplasm PubMed 
located_in cytoskeleton PubMed 
located_in focal adhesion PubMed 
located_in hemidesmosome PubMed 
located_in intermediate filament PubMed 
located_in membrane PubMed 

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Heterocephalus glaber Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference HetGla_female_1.0 Primary Assembly

Genomic

  1. NW_004624753.1 Reference HetGla_female_1.0 Primary Assembly

    Range
    18321591..18778090 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_021259192.1XP_021114851.1  dystonin

    UniProtKB/TrEMBL
    A0AAX6T079
    Conserved Domains (10) summary
    smart00150
    Location:786877
    SPEC; Spectrin repeats
    smart00250
    Location:17311761
    PLEC; Plectin repeat
    COG5069
    Location:208432
    SAC6; Ca2+-binding actin-bundling protein fimbrin/plastin (EF-Hand superfamily) [Cytoskeleton]
    cd00051
    Location:71927254
    EFh; EF-hand, calcium binding motif; A diverse superfamily of calcium sensors and calcium signal modulators; most examples in this alignment model have 2 active canonical EF hands. Ca2+ binding induces a conformational change in the EF-hand motif, leading to ...
    cd00176
    Location:63706585
    SPEC; Spectrin repeats, found in several proteins involved in cytoskeletal structure; family members include spectrin, alpha-actinin and dystrophin; the spectrin repeat forms a three helix bundle with the second helix interrupted by proline in some sequences; ...
    pfam00681
    Location:19521992
    Plectin; Plectin repeat
    pfam02187
    Location:72697343
    GAS2; Growth-Arrest-Specific Protein 2 Domain
    cl02488
    Location:52035420
    SPEC; Spectrin repeats, found in several proteins involved in cytoskeletal structure; family members include spectrin, alpha-actinin and dystrophin; the spectrin repeat forms a three helix bundle with the second helix interrupted by proline in some sequences; ...
    cl25732
    Location:38164560
    SMC_N; RecF/RecN/SMC N terminal domain
    cl28033
    Location:75127598
    Herpes_ICP4_C; Herpesvirus ICP4-like protein C-terminal region
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