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EPHA6 EPH receptor A6 [ Anas platyrhynchos (mallard) ]

Gene ID: 101799177, updated on 11-Apr-2024

Summary

Gene symbol
EPHA6
Gene description
EPH receptor A6
Locus tag
Anapl_01578
Gene type
protein coding
RefSeq status
MODEL
Organism
Anas platyrhynchos
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Anseriformes; Anatidae; Anatinae; Anas
Orthologs
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Genomic context

See EPHA6 in Genome Data Viewer
Location:
chromosome: 1
Exon count:
19
Annotation release Status Assembly Chr Location
104 current ZJU1.0 (GCF_015476345.1) 1 NC_051772.1 (95379805..95896760)
103 previous assembly IASCAAS_PekingDuck_PBH1.5 (GCF_003850225.1) 1 NC_040046.1 (108684115..109206752, complement)

Chromosome 1 - NC_051772.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC110352359 Neighboring gene uncharacterized LOC106016512 Neighboring gene transfer RNA alanine (anticodon CGC) Neighboring gene uncharacterized LOC119717766 Neighboring gene ARF like GTPase 6 Neighboring gene crystallin beta-gamma domain containing 3

Genomic regions, transcripts, and products

General gene information

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATP binding PubMed 
enables protein binding PubMed 
enables transmembrane-ephrin receptor activity PubMed 
Component Evidence Code Pubs
located_in neuron projection PubMed 
located_in plasma membrane PubMed 

General protein information

Preferred Names
LOW QUALITY PROTEIN: ephrin type-A receptor 6
Names
Ephrin type-A receptor 6

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Anas platyrhynchos Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ZJU1.0 Primary Assembly

Genomic

  1. NC_051772.1 Reference ZJU1.0 Primary Assembly

    Range
    95379805..95896760
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038183870.1XP_038039798.1  LOW QUALITY PROTEIN: ephrin type-A receptor 6

    UniProtKB/TrEMBL
    A0A8B9TLJ9
    Conserved Domains (7) summary
    cd09547
    Location:9761039
    SAM_EPH-A6; SAM domain of EPH-A6 subfamily of tyrosine kinase receptors
    cd10484
    Location:34206
    EphR_LBD_A6; Ligand Binding Domain of Ephrin type-A Receptor 6
    cd00063
    Location:443550
    FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
    cd05066
    Location:642949
    PTKc_EphR_A; Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors
    pfam00041
    Location:333427
    fn3; Fibronectin type III domain
    pfam07699
    Location:274312
    Ephrin_rec_like; Putative ephrin-receptor like
    pfam14575
    Location:566644
    EphA2_TM; Ephrin type-A receptor 2 transmembrane domain
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