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PTPRM protein tyrosine phosphatase receptor type M [ Ficedula albicollis (Collared flycatcher) ]

Gene ID: 101809655, updated on 3-Aug-2024

Summary

Gene symbol
PTPRM
Gene description
protein tyrosine phosphatase receptor type M
See related
Ensembl:ENSFALG00000006343
Gene type
protein coding
RefSeq status
MODEL
Organism
Ficedula albicollis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Muscicapidae; Ficedula
Orthologs
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Genomic context

See PTPRM in Genome Data Viewer
Location:
chromosome: 2
Exon count:
35
Annotation release Status Assembly Chr Location
101 current FicAlb1.5 (GCF_000247815.1) 2 NC_021673.1 (104355365..104814516, complement)

Chromosome 2 - NC_021673.1Genomic Context describing neighboring genes Neighboring gene microtubule crosslinking factor 1 Neighboring gene protein SOGA3-like Neighboring gene leucine rich repeat containing 30 Neighboring gene laminin subunit alpha 1

Genomic regions, transcripts, and products

Genomic Sequence:
NC_021673.1 Chromosome 2 Reference FicAlb1.5 Primary Assembly

General gene information

Gene Ontology Provided by RefSeq

Component Evidence Code Pubs
located_in membrane PubMed 

General protein information

Preferred Names
receptor-type tyrosine-protein phosphatase mu

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Ficedula albicollis Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference FicAlb1.5 Primary Assembly

Genomic

  1. NC_021673.1 Reference FicAlb1.5 Primary Assembly

    Range
    104355365..104814516 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_005041980.2XP_005042037.1  receptor-type tyrosine-protein phosphatase mu isoform X6

    UniProtKB/TrEMBL
    A0A803VVC6, U3JV32
    Related
    ENSFALP00000006636.2, ENSFALT00000006665.2
    Conserved Domains (8) summary
    cd06263
    Location:27181
    MAM; Meprin, A5 protein, and protein tyrosine phosphatase Mu (MAM) domain. MAM is an extracellular domain which mediates protein-protein interactions and is found in a diverse set of proteins, many of which are known to function in cell adhesion. Members ...
    smart00060
    Location:281360
    FN3; Fibronectin type 3 domain
    smart00137
    Location:27181
    MAM; Domain in meprin, A5, receptor protein tyrosine phosphatase mu (and others)
    smart00194
    Location:9211175
    PTPc; Protein tyrosine phosphatase, catalytic domain
    smart00410
    Location:191277
    IG_like; Immunoglobulin like
    cd00047
    Location:9481175
    PTPc; Protein tyrosine phosphatases (PTP) catalyze the dephosphorylation of phosphotyrosine peptides; they regulate phosphotyrosine levels in signal transduction pathways. The depth of the active site cleft renders the enzyme specific for phosphorylated Tyr ...
    cd00063
    Location:498580
    FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
    pfam00047
    Location:188273
    ig; Immunoglobulin domain
  2. XM_005041979.2XP_005042036.1  receptor-type tyrosine-protein phosphatase mu isoform X5

    UniProtKB/TrEMBL
    A0A803V1J5
    Conserved Domains (8) summary
    cd06263
    Location:27181
    MAM; Meprin, A5 protein, and protein tyrosine phosphatase Mu (MAM) domain. MAM is an extracellular domain which mediates protein-protein interactions and is found in a diverse set of proteins, many of which are known to function in cell adhesion. Members ...
    smart00060
    Location:281360
    FN3; Fibronectin type 3 domain
    smart00137
    Location:27181
    MAM; Domain in meprin, A5, receptor protein tyrosine phosphatase mu (and others)
    smart00194
    Location:9321186
    PTPc; Protein tyrosine phosphatase, catalytic domain
    smart00410
    Location:191277
    IG_like; Immunoglobulin like
    cd00047
    Location:9591186
    PTPc; Protein tyrosine phosphatases (PTP) catalyze the dephosphorylation of phosphotyrosine peptides; they regulate phosphotyrosine levels in signal transduction pathways. The depth of the active site cleft renders the enzyme specific for phosphorylated Tyr ...
    cd00063
    Location:498580
    FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
    pfam00047
    Location:188273
    ig; Immunoglobulin domain
  3. XM_005041977.2XP_005042034.1  receptor-type tyrosine-protein phosphatase mu isoform X3

    UniProtKB/TrEMBL
    A0A803V1J5
    Related
    ENSFALP00000016601.1, ENSFALT00000028004.1
    Conserved Domains (8) summary
    cd06263
    Location:27181
    MAM; Meprin, A5 protein, and protein tyrosine phosphatase Mu (MAM) domain. MAM is an extracellular domain which mediates protein-protein interactions and is found in a diverse set of proteins, many of which are known to function in cell adhesion. Members ...
    smart00060
    Location:281360
    FN3; Fibronectin type 3 domain
    smart00137
    Location:27181
    MAM; Domain in meprin, A5, receptor protein tyrosine phosphatase mu (and others)
    smart00194
    Location:9361190
    PTPc; Protein tyrosine phosphatase, catalytic domain
    smart00410
    Location:191277
    IG_like; Immunoglobulin like
    cd00047
    Location:9631190
    PTPc; Protein tyrosine phosphatases (PTP) catalyze the dephosphorylation of phosphotyrosine peptides; they regulate phosphotyrosine levels in signal transduction pathways. The depth of the active site cleft renders the enzyme specific for phosphorylated Tyr ...
    cd00063
    Location:498580
    FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
    pfam00047
    Location:188273
    ig; Immunoglobulin domain
  4. XM_005041982.2XP_005042039.1  receptor-type tyrosine-protein phosphatase mu isoform X8

    UniProtKB/TrEMBL
    A0A803V9U7
    Related
    ENSFALP00000019503.1, ENSFALT00000041746.1
    Conserved Domains (8) summary
    cd06263
    Location:27181
    MAM; Meprin, A5 protein, and protein tyrosine phosphatase Mu (MAM) domain. MAM is an extracellular domain which mediates protein-protein interactions and is found in a diverse set of proteins, many of which are known to function in cell adhesion. Members ...
    smart00060
    Location:281360
    FN3; Fibronectin type 3 domain
    smart00137
    Location:27181
    MAM; Domain in meprin, A5, receptor protein tyrosine phosphatase mu (and others)
    smart00194
    Location:9081162
    PTPc; Protein tyrosine phosphatase, catalytic domain
    smart00410
    Location:191277
    IG_like; Immunoglobulin like
    cd00047
    Location:9351162
    PTPc; Protein tyrosine phosphatases (PTP) catalyze the dephosphorylation of phosphotyrosine peptides; they regulate phosphotyrosine levels in signal transduction pathways. The depth of the active site cleft renders the enzyme specific for phosphorylated Tyr ...
    cd00063
    Location:498580
    FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
    pfam00047
    Location:188273
    ig; Immunoglobulin domain
  5. XM_005041978.2XP_005042035.1  receptor-type tyrosine-protein phosphatase mu isoform X4

    UniProtKB/TrEMBL
    A0A803VEX4
    Related
    ENSFALP00000021280.1, ENSFALT00000028075.1
    Conserved Domains (8) summary
    cd06263
    Location:27181
    MAM; Meprin, A5 protein, and protein tyrosine phosphatase Mu (MAM) domain. MAM is an extracellular domain which mediates protein-protein interactions and is found in a diverse set of proteins, many of which are known to function in cell adhesion. Members ...
    smart00060
    Location:281360
    FN3; Fibronectin type 3 domain
    smart00137
    Location:27181
    MAM; Domain in meprin, A5, receptor protein tyrosine phosphatase mu (and others)
    smart00194
    Location:9331187
    PTPc; Protein tyrosine phosphatase, catalytic domain
    smart00410
    Location:191277
    IG_like; Immunoglobulin like
    cd00047
    Location:9601187
    PTPc; Protein tyrosine phosphatases (PTP) catalyze the dephosphorylation of phosphotyrosine peptides; they regulate phosphotyrosine levels in signal transduction pathways. The depth of the active site cleft renders the enzyme specific for phosphorylated Tyr ...
    cd00063
    Location:498580
    FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
    pfam00047
    Location:188273
    ig; Immunoglobulin domain
  6. XM_005041976.2XP_005042033.1  receptor-type tyrosine-protein phosphatase mu isoform X2

    UniProtKB/TrEMBL
    A0A803V2S2
    Related
    ENSFALP00000017028.1, ENSFALT00000030194.1
    Conserved Domains (8) summary
    cd06263
    Location:27181
    MAM; Meprin, A5 protein, and protein tyrosine phosphatase Mu (MAM) domain. MAM is an extracellular domain which mediates protein-protein interactions and is found in a diverse set of proteins, many of which are known to function in cell adhesion. Members ...
    smart00060
    Location:281360
    FN3; Fibronectin type 3 domain
    smart00137
    Location:27181
    MAM; Domain in meprin, A5, receptor protein tyrosine phosphatase mu (and others)
    smart00194
    Location:9421196
    PTPc; Protein tyrosine phosphatase, catalytic domain
    smart00410
    Location:191277
    IG_like; Immunoglobulin like
    cd00047
    Location:9691196
    PTPc; Protein tyrosine phosphatases (PTP) catalyze the dephosphorylation of phosphotyrosine peptides; they regulate phosphotyrosine levels in signal transduction pathways. The depth of the active site cleft renders the enzyme specific for phosphorylated Tyr ...
    cd00063
    Location:498580
    FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
    pfam00047
    Location:188273
    ig; Immunoglobulin domain
  7. XM_005041975.2XP_005042032.1  receptor-type tyrosine-protein phosphatase mu isoform X1

    UniProtKB/TrEMBL
    A0A803W655
    Related
    ENSFALP00000030461.1, ENSFALT00000028800.1
    Conserved Domains (8) summary
    cd06263
    Location:27181
    MAM; Meprin, A5 protein, and protein tyrosine phosphatase Mu (MAM) domain. MAM is an extracellular domain which mediates protein-protein interactions and is found in a diverse set of proteins, many of which are known to function in cell adhesion. Members ...
    smart00060
    Location:281360
    FN3; Fibronectin type 3 domain
    smart00137
    Location:27181
    MAM; Domain in meprin, A5, receptor protein tyrosine phosphatase mu (and others)
    smart00194
    Location:9461200
    PTPc; Protein tyrosine phosphatase, catalytic domain
    smart00410
    Location:191277
    IG_like; Immunoglobulin like
    cd00047
    Location:9731200
    PTPc; Protein tyrosine phosphatases (PTP) catalyze the dephosphorylation of phosphotyrosine peptides; they regulate phosphotyrosine levels in signal transduction pathways. The depth of the active site cleft renders the enzyme specific for phosphorylated Tyr ...
    cd00063
    Location:498580
    FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
    pfam00047
    Location:188273
    ig; Immunoglobulin domain
  8. XM_005041984.2XP_005042041.1  receptor-type tyrosine-protein phosphatase mu isoform X10

    UniProtKB/TrEMBL
    A0A803V7G9
    Conserved Domains (8) summary
    cd06263
    Location:27181
    MAM; Meprin, A5 protein, and protein tyrosine phosphatase Mu (MAM) domain. MAM is an extracellular domain which mediates protein-protein interactions and is found in a diverse set of proteins, many of which are known to function in cell adhesion. Members ...
    smart00060
    Location:281360
    FN3; Fibronectin type 3 domain
    smart00137
    Location:27181
    MAM; Domain in meprin, A5, receptor protein tyrosine phosphatase mu (and others)
    smart00194
    Location:8731127
    PTPc; Protein tyrosine phosphatase, catalytic domain
    smart00410
    Location:191277
    IG_like; Immunoglobulin like
    cd00047
    Location:9001127
    PTPc; Protein tyrosine phosphatases (PTP) catalyze the dephosphorylation of phosphotyrosine peptides; they regulate phosphotyrosine levels in signal transduction pathways. The depth of the active site cleft renders the enzyme specific for phosphorylated Tyr ...
    cd00063
    Location:498580
    FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
    pfam00047
    Location:188273
    ig; Immunoglobulin domain
  9. XM_005041983.2XP_005042040.1  receptor-type tyrosine-protein phosphatase mu isoform X9

    UniProtKB/TrEMBL
    A0A803VVC6
    Conserved Domains (8) summary
    cd06263
    Location:27181
    MAM; Meprin, A5 protein, and protein tyrosine phosphatase Mu (MAM) domain. MAM is an extracellular domain which mediates protein-protein interactions and is found in a diverse set of proteins, many of which are known to function in cell adhesion. Members ...
    smart00060
    Location:281360
    FN3; Fibronectin type 3 domain
    smart00137
    Location:27181
    MAM; Domain in meprin, A5, receptor protein tyrosine phosphatase mu (and others)
    smart00194
    Location:8981152
    PTPc; Protein tyrosine phosphatase, catalytic domain
    smart00410
    Location:191277
    IG_like; Immunoglobulin like
    cd00047
    Location:9251152
    PTPc; Protein tyrosine phosphatases (PTP) catalyze the dephosphorylation of phosphotyrosine peptides; they regulate phosphotyrosine levels in signal transduction pathways. The depth of the active site cleft renders the enzyme specific for phosphorylated Tyr ...
    cd00063
    Location:498580
    FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
    pfam00047
    Location:188273
    ig; Immunoglobulin domain
  10. XM_005041981.2XP_005042038.1  receptor-type tyrosine-protein phosphatase mu isoform X7

    UniProtKB/TrEMBL
    A0A803VVC6
    Conserved Domains (8) summary
    cd06263
    Location:27181
    MAM; Meprin, A5 protein, and protein tyrosine phosphatase Mu (MAM) domain. MAM is an extracellular domain which mediates protein-protein interactions and is found in a diverse set of proteins, many of which are known to function in cell adhesion. Members ...
    smart00060
    Location:281360
    FN3; Fibronectin type 3 domain
    smart00137
    Location:27181
    MAM; Domain in meprin, A5, receptor protein tyrosine phosphatase mu (and others)
    smart00194
    Location:9111165
    PTPc; Protein tyrosine phosphatase, catalytic domain
    smart00410
    Location:191277
    IG_like; Immunoglobulin like
    cd00047
    Location:9381165
    PTPc; Protein tyrosine phosphatases (PTP) catalyze the dephosphorylation of phosphotyrosine peptides; they regulate phosphotyrosine levels in signal transduction pathways. The depth of the active site cleft renders the enzyme specific for phosphorylated Tyr ...
    cd00063
    Location:498580
    FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
    pfam00047
    Location:188273
    ig; Immunoglobulin domain
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