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LOC109045620 apoptosis-stimulating of p53 protein 2-like [ Cyprinus carpio (common carp) ]

Gene ID: 109045620, updated on 7-Dec-2023

Summary

Gene symbol
LOC109045620
Gene description
apoptosis-stimulating of p53 protein 2-like
Gene type
protein coding
RefSeq status
MODEL
Organism
Cyprinus carpio
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Cyprinidae; Cyprininae; Cyprinus
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Genomic context

See LOC109045620 in Genome Data Viewer
Location:
chromosome: A13
Exon count:
17
Annotation release Status Assembly Chr Location
101 current ASM1834038v1 (GCF_018340385.1) A13 NC_056584.1 (2848047..2864031)
100 previous assembly common carp genome (GCF_000951615.1) 41 NC_031737.1 (9662819..9681160, complement)

Chromosome A13 - NC_056584.1Genomic Context describing neighboring genes Neighboring gene uncharacterized wu:fc17b08 Neighboring gene slit homolog 1a (Drosophila) Neighboring gene ATP-binding cassette sub-family C member 2-like Neighboring gene cutC copper transporter homolog (E. coli)

Genomic regions, transcripts, and products

General gene information

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables p53 binding PubMed 
Component Evidence Code Pubs
located_in nucleus PubMed 

General protein information

Preferred Names
apoptosis-stimulating of p53 protein 2-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Cyprinus carpio Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM1834038v1 Primary Assembly

Genomic

  1. NC_056584.1 Reference ASM1834038v1 Primary Assembly

    Range
    2848047..2864031
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_042768401.1XP_042624335.1  apoptosis-stimulating of p53 protein 2-like

    UniProtKB/TrEMBL
    A0A8C1V788, A0A9Q9YRA4
    Conserved Domains (5) summary
    PRK03918
    Location:143303
    PRK03918; DNA double-strand break repair ATPase Rad50
    sd00045
    Location:861887
    ANK; ANK repeat [structural motif]
    pfam13637
    Location:892943
    Ank_4; Ankyrin repeats (many copies)
    cl17036
    Location:9911047
    SH3; Src Homology 3 domain superfamily
    cl28922
    Location:483
    Ubiquitin_like_fold; Beta-grasp ubiquitin-like fold
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