U.S. flag

An official website of the United States government

LOC109092135 polycystic kidney disease 2-like 1 protein [ Cyprinus carpio (common carp) ]

Gene ID: 109092135, updated on 7-Dec-2023

Summary

Gene symbol
LOC109092135
Gene description
polycystic kidney disease 2-like 1 protein
See related
Ensembl:ENSCCRG00000000176
Gene type
protein coding
RefSeq status
MODEL
Organism
Cyprinus carpio
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Cyprinidae; Cyprininae; Cyprinus
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

See LOC109092135 in Genome Data Viewer
Location:
chromosome: B13
Exon count:
16
Annotation release Status Assembly Chr Location
101 current ASM1834038v1 (GCF_018340385.1) B13 NC_056609.1 (17119816..17127322)
100 previous assembly common carp genome (GCF_000951615.1) 12 NC_031708.1 (1527407..1535087)

Chromosome B13 - NC_056609.1Genomic Context describing neighboring genes Neighboring gene ATP synthase membrane subunit K, mitochondrial-like Neighboring gene protein atonal homolog 7 Neighboring gene nucleolysin TIAR Neighboring gene BAG family molecular chaperone regulator 3-like

Genomic regions, transcripts, and products

General gene information

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables calcium channel activity PubMed 
enables calcium ion binding PubMed 
enables calcium-activated potassium channel activity PubMed 
enables muscle alpha-actinin binding PubMed 
enables sodium channel activity PubMed 
Component Evidence Code Pubs
located_in membrane PubMed 

General protein information

Preferred Names
polycystic kidney disease 2-like 1 protein

NCBI Reference Sequences (RefSeq)

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Cyprinus carpio Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM1834038v1 Primary Assembly

Genomic

  1. NC_056609.1 Reference ASM1834038v1 Primary Assembly

    Range
    17119816..17127322
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_019105850.2XP_018961395.2  polycystic kidney disease 2-like 1 protein

    UniProtKB/TrEMBL
    A0A8C1MG07, A0A9J8ADI7
    Conserved Domains (2) summary
    PLN03223
    Location:317623
    PLN03223; Polycystin cation channel protein; Provisional
    COG1579
    Location:579742
    COG1579; Predicted nucleic acid-binding protein, contains Zn-ribbon domain [General function prediction only]
External link. Please review our privacy policy.