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tmtc3 transmembrane O-mannosyltransferase targeting cadherins 3 [ Labrus bergylta (ballan wrasse) ]

Gene ID: 109986525, updated on 3-Dec-2024

Summary

Gene symbol
tmtc3
Gene description
transmembrane O-mannosyltransferase targeting cadherins 3
See related
Ensembl:ENSLBEG00000002565
Gene type
protein coding
RefSeq status
MODEL
Organism
Labrus bergylta
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Eupercaria; Labriformes; Labridae; Labrus
Orthologs
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Genomic context

See tmtc3 in Genome Data Viewer
Location:
chromosome: 7
Exon count:
15
Annotation release Status Assembly Chr Location
RS_2024_06 current fLabBer1.1 (GCF_963930695.1) 7 NC_089201.1 (17689060..17720978)
101 previous assembly BallGen_V1 (GCF_900080235.1) Unplaced Scaffold NW_018114513.1 (643129..676156)

Chromosome 7 - NC_089201.1Genomic Context describing neighboring genes Neighboring gene lymphatic vessel endothelial hyaluronic receptor 1b Neighboring gene RNA 5'-phosphate and 3'-OH ligase 1 Neighboring gene centrosomal protein 290 Neighboring gene kit ligand a Neighboring gene solute carrier family 23 member 1

Genomic regions, transcripts, and products

General gene information

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables mannosyltransferase activity PubMed 
enables protein binding PubMed 
Component Evidence Code Pubs
located_in endoplasmic reticulum PubMed 

General protein information

Preferred Names
protein O-mannosyl-transferase TMTC3
Names
transmembrane and tetratricopeptide repeat containing 3

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_963930695.1-RS_2024_06

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference fLabBer1.1

Genomic

  1. NC_089201.1 Reference fLabBer1.1

    Range
    17689060..17720978
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_065956929.1XP_065813001.1  protein O-mannosyl-transferase TMTC3 isoform X1

    UniProtKB/TrEMBL
    A0A3Q3EBA7
  2. XM_065956930.1XP_065813002.1  protein O-mannosyl-transferase TMTC3 isoform X2

    UniProtKB/TrEMBL
    A0A3Q3EBA7
  3. XM_020637207.3XP_020492863.2  protein O-mannosyl-transferase TMTC3 isoform X1

    UniProtKB/TrEMBL
    A0A3Q3EBA7
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