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GAPVD1 GTPase activating protein and VPS9 domains 1 [ Podarcis muralis (Common wall lizard) ]

Gene ID: 114588857, updated on 15-Mar-2024

Summary

Gene symbol
GAPVD1
Gene description
GTPase activating protein and VPS9 domains 1
See related
Ensembl:ENSPMRG00000023821
Gene type
protein coding
RefSeq status
MODEL
Organism
Podarcis muralis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Lepidosauria; Squamata; Bifurcata; Unidentata; Episquamata; Laterata; Lacertibaenia; Lacertidae; Podarcis
Orthologs
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Genomic context

See GAPVD1 in Genome Data Viewer
Location:
chromosome: Z
Exon count:
30
Annotation release Status Assembly Chr Location
100 current PodMur_1.0 (GCF_004329235.1) Z NC_041330.1 (11746026..11799763, complement)

Chromosome Z - NC_041330.1Genomic Context describing neighboring genes Neighboring gene PBX homeobox 3 Neighboring gene uncharacterized LOC114589580 Neighboring gene MAPK associated protein 1 Neighboring gene Rab9 effector protein with kelch motifs Neighboring gene heat shock protein family A (Hsp70) member 5

Genomic regions, transcripts, and products

Genomic Sequence:
NC_041330.1 Chromosome Z Reference PodMur_1.0 Primary Assembly

General gene information

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables GTPase activator activity PubMed 
enables actin filament binding PubMed 
enables calmodulin binding PubMed 
enables guanyl-nucleotide exchange factor activity PubMed 
enables small GTPase binding PubMed 
Component Evidence Code Pubs
located_in cytoplasm PubMed 
located_in cytosol PubMed 
located_in endocytic vesicle PubMed 

General protein information

Preferred Names
GTPase-activating protein and VPS9 domain-containing protein 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Podarcis muralis Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference PodMur_1.0 Primary Assembly

Genomic

  1. NC_041330.1 Reference PodMur_1.0 Primary Assembly

    Range
    11746026..11799763 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_028714536.1XP_028570369.1  GTPase-activating protein and VPS9 domain-containing protein 1 isoform X5

    UniProtKB/TrEMBL
    A0A670KLR2
    Conserved Domains (2) summary
    cd05129
    Location:84449
    RasGAP_RAP6; Ras-GTPase Activating Domain of Rab5-activating protein 6
    pfam02204
    Location:13701471
    VPS9; Vacuolar sorting protein 9 (VPS9) domain
  2. XM_028714534.1XP_028570367.1  GTPase-activating protein and VPS9 domain-containing protein 1 isoform X3

    UniProtKB/TrEMBL
    A0A670KIU5
    Conserved Domains (2) summary
    cd05129
    Location:84449
    RasGAP_RAP6; Ras-GTPase Activating Domain of Rab5-activating protein 6
    pfam02204
    Location:13811482
    VPS9; Vacuolar sorting protein 9 (VPS9) domain
  3. XM_028714533.1XP_028570366.1  GTPase-activating protein and VPS9 domain-containing protein 1 isoform X2

    UniProtKB/TrEMBL
    A0A670KLR2
    Related
    ENSPMRP00000036979.1, ENSPMRT00000039163.1
    Conserved Domains (2) summary
    cd05129
    Location:84449
    RasGAP_RAP6; Ras-GTPase Activating Domain of Rab5-activating protein 6
    pfam02204
    Location:13901491
    VPS9; Vacuolar sorting protein 9 (VPS9) domain
  4. XM_028714530.1XP_028570363.1  GTPase-activating protein and VPS9 domain-containing protein 1 isoform X1

    UniProtKB/TrEMBL
    A0A670KLR2
    Conserved Domains (2) summary
    cd05129
    Location:84449
    RasGAP_RAP6; Ras-GTPase Activating Domain of Rab5-activating protein 6
    pfam02204
    Location:13911492
    VPS9; Vacuolar sorting protein 9 (VPS9) domain
  5. XM_028714540.1XP_028570373.1  GTPase-activating protein and VPS9 domain-containing protein 1 isoform X8

    UniProtKB/TrEMBL
    A0A670KPE8
    Conserved Domains (2) summary
    cd05129
    Location:84449
    RasGAP_RAP6; Ras-GTPase Activating Domain of Rab5-activating protein 6
    pfam02204
    Location:13331434
    VPS9; Vacuolar sorting protein 9 (VPS9) domain
  6. XM_028714542.1XP_028570375.1  GTPase-activating protein and VPS9 domain-containing protein 1 isoform X10

    UniProtKB/TrEMBL
    A0A670KPE8
    Conserved Domains (2) summary
    cd05129
    Location:84449
    RasGAP_RAP6; Ras-GTPase Activating Domain of Rab5-activating protein 6
    pfam02204
    Location:13531454
    VPS9; Vacuolar sorting protein 9 (VPS9) domain
  7. XM_028714539.1XP_028570372.1  GTPase-activating protein and VPS9 domain-containing protein 1 isoform X7

    UniProtKB/TrEMBL
    A0A670KPE8
    Conserved Domains (2) summary
    cd05129
    Location:84449
    RasGAP_RAP6; Ras-GTPase Activating Domain of Rab5-activating protein 6
    pfam02204
    Location:13541455
    VPS9; Vacuolar sorting protein 9 (VPS9) domain
  8. XM_028714537.1XP_028570370.1  GTPase-activating protein and VPS9 domain-containing protein 1 isoform X6

    UniProtKB/TrEMBL
    A0A670KPE8
    Related
    ENSPMRP00000036982.1, ENSPMRT00000039166.1
    Conserved Domains (2) summary
    cd05129
    Location:84449
    RasGAP_RAP6; Ras-GTPase Activating Domain of Rab5-activating protein 6
    pfam02204
    Location:13641465
    VPS9; Vacuolar sorting protein 9 (VPS9) domain
  9. XM_028714535.1XP_028570368.1  GTPase-activating protein and VPS9 domain-containing protein 1 isoform X4

    UniProtKB/TrEMBL
    A0A670KIU5
    Related
    ENSPMRP00000036981.1, ENSPMRT00000039165.1
    Conserved Domains (2) summary
    cd05129
    Location:84449
    RasGAP_RAP6; Ras-GTPase Activating Domain of Rab5-activating protein 6
    pfam02204
    Location:13801481
    VPS9; Vacuolar sorting protein 9 (VPS9) domain
  10. XM_028714531.1XP_028570364.1  GTPase-activating protein and VPS9 domain-containing protein 1 isoform X1

    UniProtKB/TrEMBL
    A0A670KLR2
    Conserved Domains (2) summary
    cd05129
    Location:84449
    RasGAP_RAP6; Ras-GTPase Activating Domain of Rab5-activating protein 6
    pfam02204
    Location:13911492
    VPS9; Vacuolar sorting protein 9 (VPS9) domain
  11. XM_028714532.1XP_028570365.1  GTPase-activating protein and VPS9 domain-containing protein 1 isoform X1

    UniProtKB/TrEMBL
    A0A670KLR2
    Conserved Domains (2) summary
    cd05129
    Location:84449
    RasGAP_RAP6; Ras-GTPase Activating Domain of Rab5-activating protein 6
    pfam02204
    Location:13911492
    VPS9; Vacuolar sorting protein 9 (VPS9) domain
  12. XM_028714541.1XP_028570374.1  GTPase-activating protein and VPS9 domain-containing protein 1 isoform X9

    Conserved Domains (1) summary
    cd05129
    Location:84449
    RasGAP_RAP6; Ras-GTPase Activating Domain of Rab5-activating protein 6
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