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cnga1b cyclic nucleotide gated channel subunit alpha 1b [ Salarias fasciatus (jewelled blenny) ]

Gene ID: 115385428, updated on 11-Apr-2024

Summary

Gene symbol
cnga1b
Gene description
cyclic nucleotide gated channel subunit alpha 1b
See related
Ensembl:ENSSFAG00005004010
Gene type
protein coding
RefSeq status
MODEL
Organism
Salarias fasciatus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Blenniimorphae; Blenniiformes; Blennioidei; Blenniidae; Salariinae; Salarias
Orthologs
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Genomic context

See cnga1b in Genome Data Viewer
Location:
chromosome: Un
Exon count:
11
Annotation release Status Assembly Chr Location
100 current fSalaFa1.1 (GCF_902148845.1) Unplaced Scaffold NW_021941386.1 (33449..63808)

NW_021941386.1Genomic Context describing neighboring genes Neighboring gene corin, serine peptidase Neighboring gene nuclear transcription factor, X-box binding-like 1 Neighboring gene atrial natriuretic peptide-converting enzyme-like

Genomic regions, transcripts, and products

Genomic Sequence:
NW_021941386 Unplaced Scaffold Reference fSalaFa1.1 Primary Assembly

General gene information

Gene Ontology Provided by RefSeq

Component Evidence Code Pubs
part_of intracellular cyclic nucleotide activated cation channel complex PubMed 
located_in plasma membrane PubMed 

General protein information

Preferred Names
cyclic nucleotide-gated channel rod photoreceptor subunit alpha-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Salarias fasciatus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference fSalaFa1.1 Primary Assembly

Genomic

  1. NW_021941386.1 Reference fSalaFa1.1 Primary Assembly

    Range
    33449..63808
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_030087419.1XP_029943279.1  cyclic nucleotide-gated channel rod photoreceptor subunit alpha-like

    UniProtKB/TrEMBL
    A0A672FI74
    Related
    ENSSFAP00005006651.1, ENSSFAT00005006989.1
    Conserved Domains (3) summary
    cd00038
    Location:350466
    CAP_ED; effector domain of the CAP family of transcription factors; members include CAP (or cAMP receptor protein (CRP)), which binds cAMP, FNR (fumarate and nitrate reduction), which uses an iron-sulfur cluster to sense oxygen) and CooA, a heme containing CO ...
    pfam00520
    Location:36278
    Ion_trans; Ion transport protein
    pfam16526
    Location:466535
    CLZ; C-terminal leucine zipper domain of cyclic nucleotide-gated channels
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