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dysc whirlin protein dyschronic [ Drosophila subobscura ]

Gene ID: 117894979, updated on 12-Oct-2024

Summary

Gene symbol
dysc
Gene description
whirlin protein dyschronic
See related
EnsemblRapid:LOC117894979
Gene type
protein coding
RefSeq status
MODEL
Organism
Drosophila subobscura
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
Orthologs
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Genomic context

See dysc in Genome Data Viewer
Location:
chromosome: J
Exon count:
17
Annotation release Status Assembly Chr Location
100 current UCBerk_Dsub_1.0 (GCF_008121235.1) J NC_048532.1 (5365870..5398198, complement)

Chromosome J - NC_048532.1Genomic Context describing neighboring genes Neighboring gene zinc finger protein sens Neighboring gene tetratricopeptide repeat protein 36 homolog Neighboring gene uncharacterized LOC117894985 Neighboring gene Ral guanine nucleotide dissociation stimulator-like Neighboring gene G patch domain-containing protein 1 homolog

Genomic regions, transcripts, and products

Genomic Sequence:
NC_048532.1 Chromosome J Reference UCBerk_Dsub_1.0 Primary Assembly

General gene information

Gene Ontology Provided by RefSeq

Component Evidence Code Pubs
located_in cilium PubMed 
located_in plasma membrane PubMed 
part_of stereocilia ankle link complex PubMed 
located_in stereocilium tip PubMed 

General protein information

Preferred Names
LOW QUALITY PROTEIN: uncharacterized protein LOC117894979

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Drosophila subobscura Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference UCBerk_Dsub_1.0 Primary Assembly

Genomic

  1. NC_048532.1 Reference UCBerk_Dsub_1.0 Primary Assembly

    Range
    5365870..5398198 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_034802319.1XP_034658210.1  LOW QUALITY PROTEIN: uncharacterized protein LOC117894979

    Related
    XP_034658210.1, XM_034802319.1
    Conserved Domains (2) summary
    cd00992
    Location:311397
    PDZ_signaling; PDZ domain found in a variety of Eumetazoan signaling molecules, often in tandem arrangements. May be responsible for specific protein-protein interactions, as most PDZ domains bind C-terminal polypeptides, and binding to internal (non-C-terminal) ...
    cd07357
    Location:585665
    HN_L-whirlin_R2_like; second harmonin_N_like domain (repeat 2) of the long isoform of whirlin, and related domains
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