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Ptpn13 protein tyrosine phosphatase non-receptor type 13 [ Apodemus sylvaticus (European woodmouse) ]

Gene ID: 127696133, updated on 24-Mar-2024

Summary

Gene symbol
Ptpn13
Gene description
protein tyrosine phosphatase non-receptor type 13
Gene type
protein coding
RefSeq status
MODEL
Organism
Apodemus sylvaticus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Apodemus; Sylvaemus group
Orthologs
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Genomic context

See Ptpn13 in Genome Data Viewer
Location:
chromosome: 11
Exon count:
48
Annotation release Status Assembly Chr Location
RS_2023_02 current mApoSyl1.1 (GCF_947179515.1) 11 NC_067482.1 (6323546..6488223, complement)

Chromosome 11 - NC_067482.1Genomic Context describing neighboring genes Neighboring gene chromosome 11 C4orf36 homolog Neighboring gene solute carrier family 10 member 6 Neighboring gene SNW domain-containing protein 1-like Neighboring gene 60S ribosomal protein L29-like Neighboring gene uncharacterized LOC127696515 Neighboring gene mitogen-activated protein kinase 10 Neighboring gene uncharacterized LOC127696944

Genomic regions, transcripts, and products

Genomic Sequence:
NC_067482.1 Chromosome 11 Reference mApoSyl1.1

General gene information

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables phosphatidylinositol 3-kinase regulatory subunit binding IEA
Inferred from Electronic Annotation
more info
PubMed 
enables protein tyrosine phosphatase activity IEA
Inferred from Electronic Annotation
more info
PubMed 
Process Evidence Code Pubs
involved_in peptidyl-tyrosine dephosphorylation IEA
Inferred from Electronic Annotation
more info
PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
PubMed 
located_in cytoskeleton IEA
Inferred from Electronic Annotation
more info
PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
PubMed 

General protein information

Preferred Names
tyrosine-protein phosphatase non-receptor type 13

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_947179515.1-RS_2023_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mApoSyl1.1

Genomic

  1. NC_067482.1 Reference mApoSyl1.1

    Range
    6323546..6488223 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_052198663.1XP_052054623.1  tyrosine-protein phosphatase non-receptor type 13 isoform X1

  2. XM_052198664.1XP_052054624.1  tyrosine-protein phosphatase non-receptor type 13 isoform X2

  3. XM_052198665.1XP_052054625.1  tyrosine-protein phosphatase non-receptor type 13 isoform X3

  4. XM_052198666.1XP_052054626.1  tyrosine-protein phosphatase non-receptor type 13 isoform X4