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RPL3 ribosomal protein L3 [ Sus scrofa (pig) ]

Gene ID: 396768, updated on 17-Aug-2024

Summary

Official Symbol
RPL3provided by VGNC
Official Full Name
ribosomal protein L3provided by VGNC
Primary source
VGNC:VGNC:92427
See related
Ensembl:ENSSSCG00000040494
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Sus scrofa
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Suina; Suidae; Sus
Expression
Ubiquitous expression in ovary (RPKM 907.9), spleen (RPKM 869.1) and 8 other tissues See more
Orthologs
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Genomic context

See RPL3 in Genome Data Viewer
Location:
chromosome: 5
Exon count:
10
Annotation release Status Assembly Chr Location
106 current Sscrofa11.1 (GCF_000003025.6) 5 NC_010447.5 (8922697..8929768)
105 previous assembly Sscrofa10.2 (GCF_000003025.5) 5 NC_010447.4 (6216929..6223999)

Chromosome 5 - NC_010447.5Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC110260641 Neighboring gene TGF-beta activated kinase 1 (MAP3K7) binding protein 1 Neighboring gene synaptogyrin 1 Neighboring gene uncharacterized LOC110260642 Neighboring gene STEAP family member 1

Genomic regions, transcripts, and products

Expression

  • Project title: Transcriptome data used for gene annotation
  • Description: Nine kinds of tissues and a mixture of multiple tissues were sequenced for genome annotation
  • BioProject: PRJNA311523
  • Publication: PMID 27646534
  • Analysis date: Thu Dec 14 17:10:49 2017

General gene information

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables RNA binding PubMed 
enables structural constituent of ribosome PubMed 
Component Evidence Code Pubs
part_of cytosolic large ribosomal subunit PubMed 
located_in ribosome PubMed 

General protein information

Preferred Names
large ribosomal subunit protein uL3
Names
60S ribosomal protein L3
NP_001230992.1

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001244063.1NP_001230992.1  large ribosomal subunit protein uL3

    Status: VALIDATED

    Source sequence(s)
    AK239619, BP144739, BP168873, FS670157
    UniProtKB/Swiss-Prot
    A0A4X1VV59, Q29293
    UniProtKB/TrEMBL
    A0A287B5V1, A0A4X1VVA3, A0A5G2Q8T9, A0A8D1ILF2
    Related
    ENSSSCP00000051888.1, ENSSSCT00000063010.2
    Conserved Domains (1) summary
    PTZ00103
    Location:1400
    PTZ00103; 60S ribosomal protein L3; Provisional

RefSeqs of Annotated Genomes: Sus scrofa Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Sscrofa11.1 Primary Assembly

Genomic

  1. NC_010447.5 Reference Sscrofa11.1 Primary Assembly

    Range
    8922697..8929768
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
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