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LOC4339001 putative laccase-11 [ Oryza sativa Japonica Group (Japanese rice) ]

Gene ID: 4339001, updated on 12-Jul-2024

Summary

Gene symbol
LOC4339001
Gene description
putative laccase-11
Locus tag
OSNPB_050458300
Gene type
protein coding
RefSeq status
MODEL
Organism
Oryza sativa Japonica Group
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
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Genomic context

See LOC4339001 in Genome Data Viewer
Location:
chromosome: 5
Exon count:
6
Annotation release Status Assembly Chr Location
RS_2024_06 current ASM3414082v1 (GCF_034140825.1) 5 NC_089039.1 (22612902..22616954, complement)
102 previous assembly IRGSP-1.0 (GCF_001433935.1) 5 NC_029260.1 (22499466..22503539, complement)

Chromosome 5 - NC_089039.1Genomic Context describing neighboring genes Neighboring gene peptidyl-prolyl cis-trans isomerase FKBP20-1 Neighboring gene small polypeptide DEVIL 11 Neighboring gene ATP-dependent zinc metalloprotease FTSH 8, mitochondrial-like Neighboring gene laccase-12

Genomic regions, transcripts, and products

General gene information

Gene Ontology Provided by RefSeq

Component Evidence Code Pubs
located_in apoplast PubMed 

General protein information

Preferred Names
putative laccase-11
Names
Os05g0458300

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_034140825.1-RS_2024_06

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM3414082v1 Primary Assembly

Genomic

  1. NC_089039.1 Reference ASM3414082v1 Primary Assembly

    Range
    22612902..22616954 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_015782870.3XP_015638356.1  putative laccase-11

    UniProtKB/Swiss-Prot
    A3B4S2, Q0DHL5
    UniProtKB/TrEMBL
    A0A0N7KKW9, B9FJH3
    Conserved Domains (1) summary
    TIGR03389
    Location:34583
    laccase; plant
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