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timd4.L T cell immunoglobulin and mucin domain containing 4 L homeolog [ Xenopus laevis (African clawed frog) ]

Gene ID: 447692, updated on 9-Dec-2024

Summary

Official Symbol
timd4.L
Official Full Name
T cell immunoglobulin and mucin domain containing 4 L homeolog
Primary source
Xenbase:XB-GENE-6253554
Locus tag
XELAEV_18016753mg
See related
EnsemblRapid:ENSXLAG00005022918 AllianceGenome:Xenbase:XB-GENE-6253554
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Xenopus laevis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Xenopus
Also known as
timd4
Summary
Orthologous to human TIMD4 (T cell immunoglobulin and mucin domain containing 4). [provided by Alliance of Genome Resources, Dec 2024]
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Genomic context

See timd4.L in Genome Data Viewer
Location:
chromosome: 3L
Exon count:
5
Annotation release Status Assembly Chr Location
101 current Xenopus_laevis_v10.1 (GCF_017654675.1) 3L NC_054375.1 (17108012..17134501)
100 previous assembly Xenopus_laevis_v2 (GCF_001663975.1) 3L NC_030728.1 (5278249..5304651)

Chromosome 3L - NC_054375.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC121401408 Neighboring gene caprin family member 2 L homeolog Neighboring gene hepatitis A virus cellular receptor 1 homolog Neighboring gene hepatitis A virus cellular receptor 1 homolog

Genomic regions, transcripts, and products

General protein information

Preferred Names
T cell immunoglobulin and mucin domain containing 4 L homeolog

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001094362.1NP_001087831.1  T cell immunoglobulin and mucin domain containing 4 L homeolog

    See identical proteins and their annotated locations for NP_001087831.1

    Status: PROVISIONAL

    Source sequence(s)
    BC082219
    UniProtKB/TrEMBL
    A0A974DAC1
    Related
    ENSXLAP00005067440.1, ENSXLAT00005068969.1
    Conserved Domains (2) summary
    smart00410
    Location:42144
    IG_like; Immunoglobulin like
    pfam07686
    Location:42144
    V-set; Immunoglobulin V-set domain

RefSeqs of Annotated Genomes: Xenopus laevis Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Xenopus_laevis_v10.1 Primary Assembly

Genomic

  1. NC_054375.1 Reference Xenopus_laevis_v10.1 Primary Assembly

    Range
    17108012..17134501
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_041585176.1XP_041441110.1  T cell immunoglobulin and mucin domain containing 4 L homeolog isoform X1

    Conserved Domains (1) summary
    smart00409
    Location:55157
    IG; Immunoglobulin
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