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taar10d trace amine-associated receptor 10d [ Danio rerio (zebrafish) ]

Gene ID: 794512, updated on 9-Dec-2024

Summary

Official Symbol
taar10dprovided by ZNC
Official Full Name
trace amine-associated receptor 10dprovided by ZNC
Primary source
ZFIN:ZDB-GENE-041014-97
See related
Ensembl:ENSDARG00000111108 AllianceGenome:ZFIN:ZDB-GENE-041014-97
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Danio rerio
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
Also known as
si:dkey-7c18.11
Summary
Predicted to enable trace-amine receptor activity. Predicted to be involved in G protein-coupled receptor signaling pathway. Predicted to act upstream of or within signal transduction. Predicted to be located in membrane. Predicted to be active in plasma membrane. Orthologous to human TAAR1 (trace amine associated receptor 1). [provided by Alliance of Genome Resources, Dec 2024]
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Genomic context

See taar10d in Genome Data Viewer
Location:
chromosome: 20
Exon count:
1
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCz11 (GCF_000002035.6) 20 NC_007131.7 (46145718..46146729, complement)
105 previous assembly GRCz10 (GCF_000002035.5) 20 NC_007131.6 (46241575..46243309, complement)

Chromosome 20 - NC_007131.7Genomic Context describing neighboring genes Neighboring gene trace amine-associated receptor 11 Neighboring gene trace amine-associated receptor 10b Neighboring gene trace amine-associated receptor 10c Neighboring gene trace amine-associated receptor 10a

Genomic regions, transcripts, and products

Expression

  • Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
  • Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
  • BioProject: PRJEB1986
  • Analysis date: Fri Dec 8 19:48:10 2017

General gene information

Gene Ontology Provided by ZFIN

Function Evidence Code Pubs
enables G protein-coupled receptor activity  
enables trace-amine receptor activity  
enables trace-amine receptor activity  
Component Evidence Code Pubs
located_in membrane  
is_active_in plasma membrane  
located_in plasma membrane  

General protein information

Preferred Names
trace amine-associated receptor 10d

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001082902.1NP_001076371.1  trace amine-associated receptor 10d

    See identical proteins and their annotated locations for NP_001076371.1

    Status: PROVISIONAL

    Source sequence(s)
    AL929507
    UniProtKB/TrEMBL
    A0A8M1NDG6, A0A8M3B4C8, Q5QNN4
    Related
    ENSDARP00000117894.1, ENSDART00000137790.2
    Conserved Domains (2) summary
    pfam00001
    Location:54306
    7tm_1; 7 transmembrane receptor (rhodopsin family)
    cl21561
    Location:48165
    7tm_4; Olfactory receptor

RefSeqs of Annotated Genomes: GCF_000002035.6-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCz11 Primary Assembly

Genomic

  1. NC_007131.7 Reference GRCz11 Primary Assembly

    Range
    46145718..46146729 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Reference GRCz11 ALT_DRER_TU_1

Genomic

  1. NW_018395076.1 Reference GRCz11 ALT_DRER_TU_1

    Range
    272906..273917 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Reference GRCz11 ALT_DRER_TU_2

Genomic

  1. NW_018395345.1 Reference GRCz11 ALT_DRER_TU_2

    Range
    129887..130898 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
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