In this database, useful information about carbohydrate antigens, ie, glycoepitopes, and antibodies is organized as a compact encyclopedia.
Database | Last Updated |
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GlycoEpitope | November 18, 2015 |
Epitope ID | Epitope Name | Epitope Sequence |
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Homogalacturonan
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-[GalA(a1-4)]n- O-acetyled and methyl-esterified GalA may exist
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Xylogalacturonan
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Partial structure of Xylogalacturonan : ---[Xyl(a1-3)]GalA(a1-4)[Xyl(a1-3)]GalA(a1-4)GalA(a1-4)[Xyl(a1-3)]GalA(a1-4)GalA(a1-4)--- Methyl-esterified GalA may exist
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Arabinogalactan Type I
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Partial structure of Arabinogalactan Type l : ---Gal(b1-4)Gal(b1-4)[Ara(a1-5)Ara(a1-3)]Gal(b1-4)[Ara(a1-3)]Gal(b1-4)Gal(b1-4)Gal(b1-4)---
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Arabinogalactan Type ll
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Partial structure of Arabinogalactan Type ll : ---Gal(b1-3)[Ara(b1-6)]Gal(b1-3)[Ara(b1-3)Ara(b1-6)]Gal(b1-3)[Gal(b1-6)Gal(b1-6)]Gal(b1-3)[Gal(b1-6)Gal(b1-6)]Gal(b1-3)Gal(b1-3)---
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beta 1-4 Galactan
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-[Gal(b1-4)]n-
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1-6 beta Galactan
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-[Gal(b1-6)]n-
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Arabinan
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Partial structure of Arabinan : ---Ara(a1-5)Ara(a1-5)[Ara(a1-3])Ara(a1-5)Ara(a1-5)[Ara(a1-2)]Ara(a1-5)Ara(a1-5)---
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Glucomannan
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Partial structure of Glucomannan : ---Man(b1-4)Glc(b1-4)[Gal(a1-6)]Man(b1-4)Glc(b1-4)Man(b1-4)Glc(b1-4)Man(b1-4)Man(b1-4)--- 2-O-Acetyled and 3-O-Acetyled Man may exist
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Galactomannan
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Partial structure of Galactomannan : ---Man(b1-4)[Gal(a1-6)]Man(b1-4)[Gal(a1-6)]Man(b1-4)[Gal(a1-6)]Man(b1-4)Man(b1-4)Man(b1-4)---
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Xyloglucan
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Partial structure of Xyloglucan : ---Glc(b1-4)[Xyl(a1-6)]Glc(b1-4)[Gal(b1-2)Xyl(a1-6)]Glc(b1-4)[Fuc(a1-2)Gal(b1-2)Xyl(a1-6)]Glc(b1-4)[Xyl(a1-6)]Glc(b1-4)---
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GlyCosmos is a member of the GlySpace Alliance together with GlyGen and Glycomics@ExPASy.
Supported by JST NBDC Grant Number JPMJND2204
Partly supported by NIH Common Fund Grant #1U01GM125267-01