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    OXCT1A 3-oxoacid CoA transferase 1a [ Latimeria chalumnae (coelacanth) ]

    Gene ID: 102362347, updated on 26-Apr-2024

    Summary

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    Gene symbol
    OXCT1A
    Gene description
    3-oxoacid CoA transferase 1a
    See related
    Ensembl:ENSLACG00000004888
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Latimeria chalumnae
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Coelacanthiformes; Coelacanthidae; Latimeria
    Also known as
    OXCT1
    Orthologs
    human zebrafish all
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    Genomic context

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    Location:
    chromosome: 1
    Exon count:
    18
    Annotation release Status Assembly Chr Location
    RS_2024_04 current fLatCha1.pri (GCF_037176945.1) 1 NC_088139.1 (37181342..37465714, complement)
    101 previous assembly LatCha1 (GCF_000225785.1) Unplaced Scaffold NW_005820483.1 (143495..436717)

    Chromosome 1 - NC_088139.1Genomic Context describing neighboring genes Neighboring gene complement component 7a Neighboring gene uncharacterized LOC135355052 Neighboring gene phosphatidylinositol-specific phospholipase C, X domain containing 3 Neighboring gene t-SNARE domain-containing protein 1-like Neighboring gene rab7a interacting mon1-ccz1 complex subunit 1 Neighboring gene F-box protein 4

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables succinyl-CoA:3-oxo-acid CoA-transferase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in ketone body catabolic process IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in mitochondrion IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    3-oxoacid CoA transferase 1a
    Names
    3-oxoacid CoA-transferase 1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_037176945.1-RS_2024_04

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference fLatCha1.pri

    Genomic

    1. NC_088139.1 Reference fLatCha1.pri

      Range
      37181342..37465714 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_064554369.1 → XP_064410439.1  3-oxoacid CoA transferase 1a isoform X1

    2. XM_006007112.3 → XP_006007174.1  3-oxoacid CoA transferase 1a isoform X2

      UniProtKB/TrEMBL
      H3A776
      Related
      ENSLACP00000005497.1
      Conserved Domains (3) summary
      COG1788
      Location:58 → 282
      AtoD; Acyl CoA:acetate/3-ketoacid CoA transferase, alpha subunit [Lipid transport and metabolism]
      COG4670
      Location:58 → 527
      YdiF; Acyl CoA:acetate/3-ketoacid CoA transferase [Lipid transport and metabolism]
      cl00339
      Location:311 → 518
      SugarP_isomerase; SugarP_isomerase: Sugar Phosphate Isomerase family; includes type A ribose 5-phosphate isomerase (RPI_A), glucosamine-6-phosphate (GlcN6P) deaminase, and 6-phosphogluconolactonase (6PGL). RPI catalyzes the reversible conversion of ribose-5-phosphate to ...

    3. XM_006007113.3 → XP_006007175.1  3-oxoacid CoA transferase 1a isoform X3

      UniProtKB/TrEMBL
      H3A777
      Related
      ENSLACP00000005498.1
      Conserved Domains (2) summary
      COG1788
      Location:58 → 282
      AtoD; Acyl CoA:acetate/3-ketoacid CoA transferase, alpha subunit [Lipid transport and metabolism]
      cl00339
      Location:311 → 426
      SugarP_isomerase; SugarP_isomerase: Sugar Phosphate Isomerase family; includes type A ribose 5-phosphate isomerase (RPI_A), glucosamine-6-phosphate (GlcN6P) deaminase, and 6-phosphogluconolactonase (6PGL). RPI catalyzes the reversible conversion of ribose-5-phosphate to ...
    Nucleotide Protein
    Heading Accession and Version

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