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    Os9 OS9 endoplasmic reticulum lectin [ Castor canadensis (American beaver) ]

    Gene ID: 109686273, updated on 14-Mar-2024

    Summary

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    Gene symbol
    Os9
    Gene description
    OS9 endoplasmic reticulum lectin
    See related
    Ensembl:ENSCCNG00000031222
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Castor canadensis
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Castorimorpha; Castoridae; Castor
    Orthologs
    human mouse all
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    Genomic context

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    Location:
    chromosome: Un
    Exon count:
    15
    Annotation release Status Assembly Chr Location
    100 current C.can genome v1.0 (GCF_001984765.1) Unplaced Scaffold NW_017869544.1 (253449..270645, complement)

    NW_017869544.1Genomic Context describing neighboring genes Neighboring gene tetraspanin 31 Neighboring gene ArfGAP with GTPase domain, ankyrin repeat and PH domain 2 Neighboring gene beta-1,4-N-acetyl-galactosaminyltransferase 1 Neighboring gene Solute carrier family 26 member 10

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NW_017869544.1 Unplaced Scaffold Reference C.can genome v1.0

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. De Novo Genome and Transcriptome Assembly of the Canadian Beaver (Castor canadensis). Lok S, et al. G3 (Bethesda), 2017 Feb 9. PMID 28087693, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Process Evidence Code Pubs
    involved_in endoplasmic reticulum unfolded protein response IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in retrograde protein transport, ER to cytosol IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in endoplasmic reticulum lumen IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    protein OS-9

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Castor canadensis Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference C.can genome v1.0

    Genomic

    1. NW_017869544.1 Reference C.can genome v1.0

      Range
      253449..270645 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_020163541.1 → XP_020019130.1  protein OS-9 isoform X4

      UniProtKB/TrEMBL
      A0A8B7ULV8
      Conserved Domains (2) summary
      pfam07915
      Location:110 → 181
      PRKCSH; Glucosidase II beta subunit-like protein
      cl06793
      Location:175 → 236
      PRKCSH; Glucosidase II beta subunit-like protein

    2. XM_020163525.1 → XP_020019114.1  protein OS-9 isoform X2

      UniProtKB/TrEMBL
      A0A8B7UJF2
      Conserved Domains (2) summary
      pfam07915
      Location:110 → 181
      PRKCSH; Glucosidase II beta subunit-like protein
      cl06793
      Location:175 → 236
      PRKCSH; Glucosidase II beta subunit-like protein

    3. XM_020163532.1 → XP_020019121.1  protein OS-9 isoform X3

      UniProtKB/TrEMBL
      A0A8B7UHL9
      Related
      ENSCCNP00000032943.1, ENSCCNT00000041336.1
      Conserved Domains (2) summary
      pfam07915
      Location:110 → 181
      PRKCSH; Glucosidase II beta subunit-like protein
      cl06793
      Location:175 → 236
      PRKCSH; Glucosidase II beta subunit-like protein

    4. XM_020163515.1 → XP_020019104.1  protein OS-9 isoform X1

      UniProtKB/TrEMBL
      A0A250YKR8
      Related
      ENSCCNP00000032941.1, ENSCCNT00000041334.1
      Conserved Domains (2) summary
      pfam07915
      Location:110 → 181
      PRKCSH; Glucosidase II beta subunit-like protein
      cl06793
      Location:175 → 236
      PRKCSH; Glucosidase II beta subunit-like protein
    Nucleotide Protein
    Heading Accession and Version

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