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    lpcA D-sedoheptulose 7-phosphate isomerase [ Pectobacterium odoriferum ]

    Gene ID: 51390906, updated on 3-Apr-2024

    Summary

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    Gene symbol
    lpcA
    Gene description
    D-sedoheptulose 7-phosphate isomerase
    Locus tag
    EO763_RS17365
    Gene type
    protein coding
    Organism
    Pectobacterium odoriferum (strain: JK2.1, nat-host: kimchi cabbage)
    Lineage
    Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Pectobacteriaceae; Pectobacterium
    Old locus tag
    EO763_17640
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    Genomic context

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    NZ_CP034938.1Genomic Context describing neighboring genes Neighboring gene class I SAM-dependent methyltransferase Neighboring gene class II glutamine amidotransferase Neighboring gene peptidoglycan meso-diaminopimelic acid protein amidase Neighboring gene acyl-CoA dehydrogenase FadE Neighboring gene HNH nuclease YajD

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NZ_CP034938.1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Molecular cloning of the Haemophilus influenzae gmhA (lpcA) gene encoding a phosphoheptose isomerase required for lipooligosaccharide biosynthesis. Brooke JS, et al. J Bacteriol, 1996 Jun. PMID 8655517, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    General protein information

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    Preferred Names
    D-sedoheptulose 7-phosphate isomerase
    WP_005975726.1

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NZ_CP034938.1 Reference assembly

      Range
      3835416..3835997 complement
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      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. WP_005975726.1 MULTISPECIES: D-sedoheptulose 7-phosphate isomerase [Pectobacterium]

      See identical proteins and their annotated locations for WP_005975726.1

      UniProtKB/Swiss-Prot
      C6DCY7, Q6D1H3
      UniProtKB/TrEMBL
      A0A086E3S2, A0A093SLP9, A0A094RS66, A0A0H3I6P0, A0A1D7Z308, A0A1M5TZ18, A0A1V2QZW3, A0A249Q8G7, A0A2T3VRJ8, A0A4U7KBL0, A0A7V8PHD0, A0A7V8PI81, A0A7W2E7K9, A0A9X8P384, A0AA41RL34, A0AA85ZNL1, A0AA93ARU1
      Conserved Domains (1) summary
      PRK00414
      Location:1 → 191
      gmhA; D-sedoheptulose 7-phosphate isomerase
    Nucleotide Protein
    Heading Accession and Version

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