GlycoNAVI Lectins
GlycoNAVI-Lectins is a subset of GlycoNAVI-Proteins, a dataset of glycan and protein information, which is the content of GlycoNAVI. This is the content of GlycoNAVI.
| Source | Last Updated |
|---|---|
| GlycoNAVI Lectins | December 03, 2025 |
| PDB ID | UniProt ID | Title | Descriptor ▲ |
|---|---|---|---|
| 1ABR | P11140 | CRYSTAL STRUCTURE OF ABRIN-A | ABRIN-A COMPLEXED WITH TWO SUGAR CHAINS |
| 1JPC | P30617 | MANNOSE-SPECIFIC AGGLUTININ (LECTIN) FROM SNOWDROP (GALANTHUS NIVALIS) BULBS IN COMPLEX WITH MANNOSE-ALPHA1,6-(MANNOSE-ALPHA1,3)-MANNOSE-ALPHA1,6-(MANNOSE-ALPHA1,3)-MANNOSE | AGGLUTININ |
| 1MSA | P30617 | MANNOSE-SPECIFIC AGGLUTININ (LECTIN) FROM SNOWDROP (GALANTHUS NIVALIS) BULBS COMPLEXED WITH METHYL-ALPHA-D-MANNOSIDE | AGGLUTININ |
| 1NIV | P30617 | MANNOSE-SPECIFIC AGGLUTININ (LECTIN) FROM SNOWDROP (GALANTHUS NIVALIS) BULBS IN COMPLEX WITH MANNOSE-ALPHA 1,3-METHYL-D-MANNOSE | AGGLUTININ |
| 1VIW | P02873 | TENEBRIO MOLITOR ALPHA-AMYLASE-INHIBITOR COMPLEX | ALPHA-AMYLASE, ALPHA-AMYLASE-INHIBITOR |
| 3C9Z | P33183 | Sambucus nigra agglutinin II (SNA-II), tetragonal crystal form | Agglutinin II (SNA-II) |
| 3CA1 | P33183 | Sambucus nigra agglutinin II (SNA-II)- tetragonal crystal form- complexed to galactose | Agglutinin II (SNA-II) |
| 3CA6 | P33183 | Sambucus nigra agglutinin II (SNA-II)- tetragonal crystal form- complexed to Tn antigen | Agglutinin II (SNAV) |
| 3CA4 | P33183 | Sambucus nigra agglutinin II, tetragonal crystal form- complexed to lactose | Agglutinin II, SNA-II |
| 3CAH | P33183 | Sambucus nigra aggutinin II. tetragonal crystal form- complexed to fucose | Agglutinin II, SNA-II |
| 3CA3 | P33183 | Crystal structure of Sambucus Nigra Agglutinin II (SNA-II)-tetragonal crystal form- complexed to N-Acetylgalactosamine | Agglutinin II, SNA-II |
| 3CA5 | P33183 | Crystal structure of Sambucus nigra agglutinin II (SNA-II)-tetragonal crystal form- complexed to alpha1 methylgalactose | Agglutinin II, SNA-II |
| 5VKJ | P20273 | Crystal structure of human CD22 Ig domains 1-3 | B-cell receptor CD22 |
| 5VL3 | P20273 | CD22 d1-d3 in complex with therapeutic Fab Epratuzumab | B-cell receptor CD22, Epratuzumab Fab Heavy Chain,Epratuzumab Fab Heavy Chain, Epratuzumab Fab Light Chain,Epratuzumab Fab Light Chain |
| 6ENY | P27797 | Structure of the human PLC editing module | Beta-2-microglobulin, Tapasin, Protein disulfide-isomerase A3 (E.C.5.3.4.1), HLA class I histocompatibility antigen, A-3 alpha chain, Calreticulin |
| 2RG9 | P81446 | Crystal structure of viscum album mistletoe lectin I in native state at 1.95 A resolution, comparison of structure active site conformation in ricin and in viscumin | Beta-galactoside-specific lectin 1 chain A isoform 1 (E.C.3.2.2.22), Beta-galactoside-specific lectin 1 chain B |
| 4ZES | Q8WTT0 | Blood dendritic cell antigen 2 (BDCA-2) complexed with methyl-mannoside | Blood dendritic cell antigen 2 |
| 4ZET | Q8WTT0 | Blood dendritic cell antigen 2 (BDCA-2) complexed with GalGlcNAcMan | Blood dendritic cell antigen 2 |
| 4IOP | Q6UVW9 | Crystal structure of NKp65 bound to its ligand KACL | C-type lectin domain family 2 member A, Killer cell lectin-like receptor subfamily F member 2 |
| 4IOP | D3W0D1 | Crystal structure of NKp65 bound to its ligand KACL | C-type lectin domain family 2 member A, Killer cell lectin-like receptor subfamily F member 2 |
| 3P5H | Q9UJ71 | Structure of the carbohydrate-recognition domain of human Langerin with Laminaritriose | C-type lectin domain family 4 member K |
| 3P5F | Q9UJ71 | Structure of the carbohydrate-recognition domain of human Langerin with man2 (Man alpha1-2 Man) | C-type lectin domain family 4 member K |
| 3P7G | Q9UJ71 | Structure of the human Langerin carbohydrate recognition domain in complex with mannose | C-type lectin domain family 4 member K |
| 3P5G | Q9UJ71 | Structure of the carbohydrate-recognition domain of human Langerin with Blood group B trisaccharide (Gal alpha1-3(Fuc alpha1-2)Gal) | C-type lectin domain family 4 member K |
| 3P5E | Q9UJ71 | Structure of the carbohydrate-recognition domain of human Langerin with man4 (Man alpha1-3(Man alpha1-6)Man alpha1-6Man) | C-type lectin domain family 4 member K |
| 3P5I | Q9UJ71 | Structure of the carbohydrate-recognition domain of human Langerin with 6-SO4-Gal-GlcNAc | C-type lectin domain family 4 member K |
| 3P5D | Q9UJ71 | Structure of the carbohydrate-recognition domain of human Langerin with man5 (Man alpha1-3(Man alpha1-6)Man alpha1-6)(Man- alpha1-3)Man | C-type lectin domain family 4 member K |
| 1HJW | P36222 | Crystal structure of hcgp-39 in complex with chitin octamer | CHITINASE-3 LIKE PROTEIN 1 |
| 4AY1 | Q15782 | Human YKL-39 is a pseudo-chitinase with retained chitooligosaccharide binding properties | CHITINASE-3-LIKE PROTEIN 2 |
| 1IIY | P81180 | Solution NMR Structure of Complex of 1:2 Cyanovirin-N:Man-Alpha1,2-Man-Alpha Restrained Regularized Mean Coordinates | CYANOVIRIN-N |
| 6A1T | Q05315 | Charcot-Leyden crystal protein/Galectin-10 variant E33A with lactose | Charcot-Leyden crystal protein/Galectin-10 variant |
| 1NWS | P36222 | Crystal structure of human cartilage gp39 (HC-gp39) in complex with chitobiose | Chitinase-3 like protein 1 |
| 1NWT | P36222 | Crystal structure of human cartilage gp39 (HC-gp39) in complex with chitopentaose | Chitinase-3 like protein 1 |
| 1NWR | P36222 | Crystal structure of human cartilage gp39 (HC-gp39) | Chitinase-3 like protein 1 |
| 2OX9 | Q8K4Q8 | Mouse Scavenger Receptor C-type Lectin carbohydrate-recognition domain. | Collectin placenta 1 |
| 5Z5N | P02866 | Crystal structure of ConA-R1M | Concanavalin-A |
| 5Z5L | P02866 | Crystal structure of ConA-R5M | Concanavalin-A |
| 5ZAC | P02866 | Crystal structure of ConA-R2M | Concanavalin-A |
| 4PF5 | P02866 | Crystal structure of Concanavalin A complexed with a synthetic derivative of high-mannose chain | Concanavalin-A |
| 1G1T | P16581 | CRYSTAL STRUCTURE OF E-SELECTIN LECTIN/EGF DOMAINS COMPLEXED WITH SLEX | E-SELECTIN, SACCHARIDE COMPLEX |
| 1E0X | P26514 | XYLANASE 10A FROM SREPTOMYCES LIVIDANS. XYLOBIOSYL-ENZYME INTERMEDIATE AT 1.65 A | ENDO-1,4-BETA-XYLANASE A (E.C.3.2.1.8) |
| 1E0V | P26514 | Xylanase 10A from Sreptomyces lividans. cellobiosyl-enzyme intermediate at 1.7 A | ENDO-1,4-BETA-XYLANASE A (E.C.3.2.1.8) |
| 1KNM | P26514 | Streptomyces lividans Xylan Binding Domain cbm13 in Complex with Lactose | ENDO-1,4-BETA-XYLANASE A (E.C.3.2.1.8) |
| 1MC9 | P26514 | STREPROMYCES LIVIDANS XYLAN BINDING DOMAIN CBM13 IN COMPLEX WITH XYLOPENTAOSE | ENDO-1,4-BETA-XYLANASE A (E.C.3.2.1.8) |
| 6C5V | P0C6Z5 | An anti-gH/gL antibody that neutralizes dual-tropic infection defines a site of vulnerability on Epstein-Barr virus | Envelope glycoprotein H, Envelope glycoprotein L, Glycoprotein 42, Antibody Fab AMMO1 heavy chain, Antibody Fab AMMO1 light chain |
| 5T1D | P0C6Z5 | Crystal structure of EBV gHgL/gp42/E1D1 complex | Envelope glycoprotein H, Envelope glycoprotein L, Glycoprotein 42, E1D1 IgG2a heavy chain, E1D1 IgG2a light chain |
| 1O9V | Q99003 | F17-aG lectin domain from Escherichia coli in complex with a selenium carbohydrate derivative | F17-AG LECTIN DOMAIN |
| 2JHK | O00602 | Structure of globular heads of M-ficolin complexed with N-acetyl-D- glucosamine | FICOLIN-1 |
| 2JHI | O00602 | Structure of globular heads of M-ficolin complexed with N-acetyl-D- galactosamine | FICOLIN-1 |
| 2JHL | O00602 | Structure of globular heads of M-ficolin complexed with sialic acid | FICOLIN-1 |
GlyCosmos is a member of the GlySpace Alliance together with GlyGen and Glycomics@ExPASy.
Supported by JST NBDC Grant Number JPMJND2204
Partly supported by NIH Common Fund Grant #1U01GM125267-01
This work is licensed under Creative Commons Attribution 4.0 International
GlyCosmos Portal v4.4.0
Last updated: December 8, 2025