GlyCosmos Glycoproteins

Integrated list of glycoproteins extracted from UniProt and annotated with glycosylation data from GlyGen and GlyConnect. For each entry, information such as glycosylation site, glycans, diseases, 3D structures, and pathway information are available.

Database Last Updated
GlyConnect April 19, 2023
GlycoProtDB October 1, 2021
GlyGen October 2, 2023
Human Protein Atlas June 19, 2023 (Protein Atlas version 23)
MCAW-DB July 10, 2019
The O-GlcNAc Database April 10, 2023 (v1.3)
Reactome February 28, 2024 (Version 87)
UniProt December 27, 2023
Protein Name UniProt ID Gene Symbol Species ▲ Taxonomy ID No. of Glycosylation Sites No. of GlyTouCan IDs GO Labels GO IDs
  • J437_LFUL014917
123851
1
  • ATP binding
  • membrane
  • nucleotidyltransferase activity
  • GO:0005524
  • GO:0016020
  • GO:0016779
  • FICD
630675
1
  • ATP binding
  • GO:0005524
  • FICD
630676
1
  • ATP binding
  • GO:0005524
  • rh2a-beta
74125
2
  • G protein-coupled receptor activity
  • membrane
  • metal ion binding
  • photoreceptor activity
  • phototransduction
  • visual perception
  • GO:0004930
  • GO:0007601
  • GO:0007602
  • GO:0009881
  • GO:0016020
  • GO:0046872
  • RH1
242821
2
  • G protein-coupled receptor activity
  • membrane
  • metal ion binding
  • photoreceptor activity
  • phototransduction
  • visual perception
  • GO:0004930
  • GO:0007601
  • GO:0007602
  • GO:0009881
  • GO:0016020
  • GO:0046872
  • RH1
172530
2
  • G protein-coupled receptor activity
  • membrane
  • metal ion binding
  • photoreceptor activity
  • phototransduction
  • visual perception
  • GO:0004930
  • GO:0007601
  • GO:0007602
  • GO:0009881
  • GO:0016020
  • GO:0046872
  • PCSK9
9519
1
  • Golgi apparatus
  • apolipoprotein binding
  • apoptotic process
  • cell surface
  • cholesterol metabolic process
  • cytoplasm
  • early endosome
  • endoplasmic reticulum
  • extracellular region
  • late endosome
  • low-density lipoprotein particle binding
  • low-density lipoprotein particle receptor catabolic process
  • lysosome
  • protein self-association
  • proteolysis
  • regulation of neuron apoptotic process
  • serine-type endopeptidase activity
  • very-low-density lipoprotein particle binding
  • GO:0004252
  • GO:0005576
  • GO:0005737
  • GO:0005764
  • GO:0005769
  • GO:0005770
  • GO:0005783
  • GO:0005794
  • GO:0006508
  • GO:0006915
  • GO:0008203
  • GO:0009986
  • GO:0030169
  • GO:0032802
  • GO:0034185
  • GO:0034189
  • GO:0043523
  • GO:0043621
  • RNASE1
9519
2
  • extracellular region
  • lyase activity
  • nucleic acid binding
  • ribonuclease A activity
  • GO:0003676
  • GO:0004522
  • GO:0005576
  • GO:0016829
  • FUT1
9519
3
  • Golgi cisterna membrane
  • alpha-(1,2)-fucosyltransferase activity
  • carbohydrate metabolic process
  • fucosylation
  • galactoside 2-alpha-L-fucosyltransferase activity
  • lipid metabolic process
  • olfactory bulb development
  • positive regulation of cell-matrix adhesion
  • positive regulation of endothelial cell migration
  • positive regulation of endothelial cell-matrix adhesion via fibronectin
  • positive regulation of sprouting angiogenesis
  • protein glycosylation
  • regulation of cell adhesion
  • regulation of endothelial cell proliferation
  • GO:0001936
  • GO:0001954
  • GO:0005975
  • GO:0006486
  • GO:0006629
  • GO:0008107
  • GO:0010595
  • GO:0021772
  • GO:0030155
  • GO:0031127
  • GO:0032580
  • GO:0036065
  • GO:1903672
  • GO:1904906
  • GP
378830
22
  • fusion of virus membrane with host endosome membrane
  • host cell plasma membrane
  • membrane
  • viral entry into host cell
  • viral envelope
  • virion attachment to host cell
  • virion membrane
  • GO:0016020
  • GO:0019031
  • GO:0019062
  • GO:0020002
  • GO:0039654
  • GO:0046718
  • GO:0055036
Displaying entries 69321 - 69330 of 120208 in total

International Collaboration

GlyCosmos is a member of the GlySpace Alliance together with GlyGen and Glycomics@ExPASy.

Acknowledgements

Supported by JST NBDC Grant Number JPMJND2204

Partly supported by NIH Common Fund Grant #1U01GM125267-01