GlyCosmos Portal

GlyCosmos Glycoproteins

Integrated list of glycoproteins extracted from UniProt and annotated with glycosylation data from GlyGen and GlyConnect. For each entry, information such as glycosylation site, glycans, diseases, 3D structures, and pathway information are available.

Database	Last Updated
GlyConnect	April 19, 2023
GlycoProtDB	October 1, 2021
GlyGen	April 24, 2023
Human Protein Atlas	June 19, 2023 (Protein Atlas version 23)
MCAW-DB	July 10, 2019
The O-GlcNAc Database	April 10, 2023 (v1.3)
Reactome	March 22, 2023 (Version 83)
UniProt	July 5, 2023

Protein Name	UniProt ID	Gene Symbol	Gene Symbol Aliases	Gene Symbol All	Species	Taxonomy ID	No. of Glycosylation Sites	No. of GlyTouCan IDs	GO Labels	GO IDs
ceramidase	A0A2U4B551	NAAA		NAAA	Tursiops truncatus	9739	4		DNA-binding transcription factor binding N-(long-chain-acyl)ethanolamine deacylase activity N-acylethanolamine metabolic process N-acylphosphatidylethanolamine metabolic process N-acylsphingosine amidohydrolase activity ceramidase activity extrinsic component of membrane fatty acid amide hydrolase activity fatty acid metabolic process lysosome sphingosine metabolic process	GO_0005764 GO_0006631 GO_0006670 GO_0017040 GO_0017064 GO_0019898 GO_0047412 GO_0070291 GO_0070292 GO_0102121 GO_0140297
Rhodopsin (Fragment)	A0A852HSR5	Rho		Rho	Nicator chloris	237433	2		G protein-coupled receptor activity light absorption membrane metal ion binding photoreceptor activity phototransduction visual perception	GO_0004930 GO_0007601 GO_0007602 GO_0009881 GO_0016020 GO_0016037 GO_0046872
KCNKH protein (Fragment)	A0A7L1CFA0	Kcnk17		Kcnk17	Illadopsis cleaveri	201329	1		membrane potassium channel activity	GO_0005267 GO_0016020
Voltage-dependent L-type calcium channel subunit alpha	A0A803VUP5	CACNA1C		CACNA1C	Ficedula albicollis	59894	1		T-tubule calmodulin binding dendrite metal ion binding perikaryon postsynaptic density membrane regulation of monoatomic ion transmembrane transport voltage-gated calcium channel activity voltage-gated calcium channel complex	GO_0005245 GO_0005516 GO_0005891 GO_0030315 GO_0030425 GO_0034765 GO_0043204 GO_0046872 GO_0098839
Phosphoinositide phospholipase C	A0A8C4KUC7	PLCD4		PLCD4	Dromaius novaehollandiae	8790	1		calcium ion binding intracellular signal transduction lipid catabolic process phosphatidylinositol phospholipase C activity	GO_0004435 GO_0005509 GO_0016042 GO_0035556
Matrix protein 2	Q5DXQ1	M2	M	M2 M	Influenza A virus (A/New York/48/2003(H3N2))	311626	1		host cell plasma membrane membrane monoatomic ion channel activity pore formation by virus in membrane of host cell protein complex oligomerization proton transmembrane transporter activity suppression by virus of host autophagy virion membrane	GO_0005216 GO_0015078 GO_0016020 GO_0020002 GO_0039521 GO_0039707 GO_0051259 GO_0055036
Transient receptor potential cation channel subfamily M member 3	Q9HCF6	TRPM3	KIAA1616 LTRPC3	TRPM3 KIAA1616 LTRPC3	Homo sapiens	9606	1	1	calcium channel activity calcium ion transmembrane transport monoatomic cation channel activity monoatomic cation transmembrane transport monoatomic cation transport plasma membrane protein tetramerization	GO_0005261 GO_0005262 GO_0005886 GO_0006812 GO_0051262 GO_0070588 GO_0098655
GDP-fucose protein O-fucosyltransferase 1	Q6EV70	Pofut1	Fut12	Pofut1 Fut12	Rattus norvegicus	10116	2		Notch signaling pathway angiogenesis endoplasmic reticulum fucose metabolic process fucosyltransferase activity heart development membrane nervous system development peptide-O-fucosyltransferase activity protein O-linked fucosylation protein O-linked glycosylation regulation of Notch signaling pathway somitogenesis	GO_0001525 GO_0001756 GO_0005783 GO_0006004 GO_0006493 GO_0007219 GO_0007399 GO_0007507 GO_0008417 GO_0008593 GO_0016020 GO_0036066 GO_0046922
Transcription initiation factor TFIID subunit 9B	Q9HBM6	TAF9B	TAF9L	TAF9B TAF9L	Homo sapiens	9606	10	2	DNA-templated transcription initiation RNA polymerase II general transcription initiation factor activity negative regulation of apoptotic process negative regulation of intrinsic apoptotic signaling pathway in response to DNA damage by p53 class mediator negative regulation of transcription by RNA polymerase II nucleoplasm positive regulation of cell growth protein heterodimerization activity protein stabilization transcription corepressor activity transcription factor TFIID complex transcription factor TFTC complex	GO_0000122 GO_0003714 GO_0005654 GO_0005669 GO_0006352 GO_0016251 GO_0030307 GO_0033276 GO_0043066 GO_0046982 GO_0050821 GO_1902166
Carotenoid-cleaving dioxygenase, mitochondrial	Q9BYV7	BCO2	BCDO2	BCO2 BCDO2	Homo sapiens	9606		1	9,10 (9', 10')-carotenoid-cleaving dioxygenase activity beta,beta-carotene-9',10'-cleaving oxygenase activity beta-carotene 15,15'-dioxygenase activity carotene catabolic process carotene metabolic process carotenoid dioxygenase activity carotenoid metabolic process lutein catabolic process lycopene catabolic process metal ion binding mitochondrial matrix mitochondrion oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen regulation of mitochondrial membrane potential regulation of reactive oxygen species metabolic process retinal metabolic process retinoic acid metabolic process xanthophyll catabolic process zeaxanthin catabolic process	GO_0003834 GO_0005739 GO_0005759 GO_0010436 GO_0010437 GO_0016116 GO_0016119 GO_0016121 GO_0016124 GO_0016702 GO_0042573 GO_0042574 GO_0046872 GO_0051881 GO_0062172 GO_0102076 GO_1901176 GO_1901826 GO_2000377