PACDB provides the information on pathogens (e.g. bacteria, fungus, toxin and virus) adhering to carbohydrates expressed on the cell surface of host animals or plants.
Database | Last Updated |
---|---|
Pathogen Adherence to Carbohydrate Database (PACDB) | June 1, 2016 |
Species | Pathogen Adherence Molecule | Ligand Name | Ligand Feature | Target Source | Glycan Sequence | Binding ▲ | PubMed ID |
---|---|---|---|---|---|---|---|
Unknown
|
Asialo GM1 (Gangliotetraosylceramide; Gg4; GA1)
|
Oligoglycosylceramides
|
Gal(b1-3)GalNAc(b1-4)Gal(b1-4)Glc(b1-1)Cer
|
Not Binding
|
|||
Unknown
|
Chondroitin 4-sulfate (C-4S)
|
Glycosaminoglycans
|
Vero cells
|
Not Binding
|
|||
Unknown
|
Heparin (completely desulfated, N-acetylated)
|
Glycosaminoglycans
|
Vero cells
|
Not Binding
|
|||
P-fimbriae
|
GL-IV glycolipid
|
Glycolipids
|
Not Binding
|
||||
P-fimbriae
|
GL-II glycolipid
|
Glycolipids
|
Not Binding
|
||||
(class I/III)
|
GL-IV glycolipid
|
Glycolipids
|
Not Binding
|
||||
(class III)
|
GL-III glycolipid
|
Glycolipids
|
Not Binding
|
||||
(class I/III)
|
GL-II glycolipid
|
Glycolipids
|
Not Binding
|
||||
P-fimbriae
|
GL-III glycolipid
|
Glycolipids
|
Not Binding
|
||||
Unknown
|
Endothelial cell-specific molecule (ESM)
|
Proteoglycans
|
Not Binding
|
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Supported by JST NBDC Grant Number JPMJND2204
Partly supported by NIH Common Fund Grant #1U01GM125267-01