Pathogen Adherence to Carbohydrate Database (PACDB)
PACDB provides the information on pathogens (e.g. bacteria, fungus, toxin and virus) adhering to carbohydrates expressed on the cell surface of host animals or plants.
| Database | Last Updated |
|---|---|
| Pathogen Adherence to Carbohydrate Database (PACDB) | June 1, 2016 |
| Species | Pathogen Adherence Molecule | Ligand Name | Ligand Feature | Target Source | Glycan Sequence ▲ | Binding | PubMed ID |
|---|---|---|---|---|---|---|---|
|
17-kDa HBP (Heparin-binding protein)
|
Thrombospondin (TSP)
|
Glycoproteins
|
Binding
|
||||
|
Lectin-like proteins (adhesin)
|
Mr 89,000 PRG (Proline-Rich Glycoprotein)
|
Glycoproteins
|
Binding
|
||||
|
PT (subunit S2 of B oligomer)
|
Haptoglobin
|
Glycoproteins
|
Binding
|
||||
|
17-kDa HBP (Heparin-binding protein)
|
Thrombospondin (TSP)
|
Glycoproteins
|
Binding
|
||||
|
DLP (Double-layered virus particles)
|
Asialo gangliosides
|
Neutral Glycosphingolipids
|
Binding
|
||||
|
Glycoprotein (GP)
|
O-mannosyl glycans on alpha-dystroglycan (DG)
|
O-glycans
|
Binding
|
||||
|
hLT
|
Blood group A antigen analog
|
Oligosaccharides
|
Binding
|
||||
|
Unknown
|
Endothelial cell-specific molecule (ESM)
|
Proteoglycans
|
Not Binding
|
||||
|
"DbpA, DbpB, Bgp"
|
Decorin
|
Proteoglycans
|
Binding
|
||||
|
"MSP1a, MSP1b, MSP2"
|
unknown carbohydrate ligand
|
Saccharides
|
Binding
|
Displaying entries 1831 - 1840 of 1840 in total
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International Collaboration
GlyCosmos is a member of the GlySpace Alliance together with GlyGen and Glycomics@ExPASy.
Acknowledgements
Supported by JST NBDC Grant Number JPMJND2204
Partly supported by NIH Common Fund Grant #1U01GM125267-01
