PACDB provides the information on pathogens (e.g. bacteria, fungus, toxin and virus) adhering to carbohydrates expressed on the cell surface of host animals or plants.
Database | Last Updated |
---|---|
Pathogen Adherence to Carbohydrate Database (PACDB) | June 1, 2016 |
Species | Pathogen Adherence Molecule | Ligand Name | Ligand Feature | Target Source | Glycan Sequence | Binding | PubMed ID ▲ |
---|---|---|---|---|---|---|---|
PT (subunit S3 of B oligomer)
|
Gangliosides
|
Sialoglycosphingolipids
|
Human alveolar macrophages
|
Binding
|
|||
Pertussis toxin
|
Gangliosides
|
Sialoglycosphingolipids
|
Human alveolar macrophages
|
Binding
|
|||
PT (subunits S2/S3 of B oligomer)
|
Glucosylceramide
|
Monoglycosylceramides
|
Human cilia of the respiratory epithelium
|
Glc(b1-1)Cer
|
Binding
|
||
Pertussis toxin
|
Glucosylceramide
|
Monoglycosylceramides
|
Human cilia of the respiratory epithelium
|
Glc(b1-1)Cer
|
Binding
|
||
Pertussis toxin
|
Lactosylceramide (Lactocerebroside)
|
Diosylceramides
|
Human cilia of the respiratory epithelium
|
Gal(b1-4)Glc(b1-1)Cer
|
Binding
|
||
PT (subunit S2 of B oligomer)
|
Lactosylceramide (Lactocerebroside)
|
Diosylceramides
|
Human cilia of the respiratory epithelium
|
Gal(b1-4)Glc(b1-1)Cer
|
Binding
|
||
Pertussis toxin
|
Haptoglobin
|
Glycoproteins
|
Binding
|
||||
PT (subunit S2 of B oligomer)
|
Haptoglobin
|
Glycoproteins
|
Binding
|
||||
Unknown
|
Salivary glycoprotein
|
Glycoproteins
|
Human saliva
|
Binding
|
|||
Unknown
|
GD1a
|
Disialoglycosphingolipids
|
NeuAc(a2-3)Gal(b1-3)GalNAc(b1-4)[NeuAc(a2-3)]Gal(b1-4)Glc(b1-1)Cer
|
Binding
|
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Supported by JST NBDC Grant Number JPMJND2204
Partly supported by NIH Common Fund Grant #1U01GM125267-01