Pathogen Adherence to Carbohydrate Database (PACDB)

PACDB provides the information on pathogens (e.g. bacteria, fungus, toxin and virus) adhering to carbohydrates expressed on the cell surface of host animals or plants.

Database Last Updated
Pathogen Adherence to Carbohydrate Database (PACDB) June 1, 2016
Species Pathogen Adherence Molecule Ligand Name Ligand Feature Target Source Glycan Sequence Binding PubMed ID ▲
Unknown
GM2(NeuAc)
Monosialoglycosphingolipids
GalNAc(b1-4)[NeuAc(a2-3)]Gal(b1-4)Glc(b1-1)Cer
Not Binding
Unknown
Fetuin
Glycoproteins
Not Binding
Unknown
GM3(Neu4Ac5Gc)
Monosialoglycosphingolipids
Ac(-4)Neu5Gc(a2-3)Gal(b1-4)Glc(b1-1)Cer
Not Binding
Unknown
Lactosylceramide (Lactocerebroside)
Diosylceramides
Gal(b1-4)Glc(b1-1)Cer
Not Binding
Unknown
Asialo GM1 (Gangliotetraosylceramide; Gg4; GA1)
Oligoglycosylceramides
Gal(b1-3)GalNAc(b1-4)Gal(b1-4)Glc(b1-1)Cer
Not Binding
Unknown
Endothelial cell-specific molecule (ESM)
Proteoglycans
Not Binding
FnBPB (fibronectin binding protein)
Fibronectin
Glycoproteins
Binding
FnBPA (fibronectin binding protein)
Fibronectin
Glycoproteins
Binding
HIV surface glycoprotein gp120
Galactosylceramide (Galactocerebroside)
Monoglycosylceramides
Neural cell lines
Gal(b1-1)Cer
Binding
Envelope glycoprotein gp120
Galactosyl sulfatide
Sulfoglycosphingolipids
Neural receptor
HSO3(-3)Gal(b1-1)Cer
Binding
Displaying entries 31 - 40 of 1840 in total

International Collaboration

GlyCosmos is a member of the GlySpace Alliance together with GlyGen and Glycomics@ExPASy.

Acknowledgements

Supported by JST NBDC Grant Number JPMJND2204

Partly supported by NIH Common Fund Grant #1U01GM125267-01