Pathogen Adherence to Carbohydrate Database (PACDB)
PACDB provides the information on pathogens (e.g. bacteria, fungus, toxin and virus) adhering to carbohydrates expressed on the cell surface of host animals or plants.
| Database | Last Updated |
|---|---|
| Pathogen Adherence to Carbohydrate Database (PACDB) | June 1, 2016 |
| Species | Pathogen Adherence Molecule | Ligand Name ▲ | Ligand Feature | Target Source | Glycan Sequence | Binding | PubMed ID |
|---|---|---|---|---|---|---|---|
|
Unknown
|
116 kDa glycoprotein (containing sialic acid residues with N-linked glycans)
|
N-glycans
|
Neurones of all brain regions
|
Binding
|
|||
|
Unknown
|
A6 type 2 glycosphingolipid (A6-2)
|
Oligoglycosylceramides
|
Dog small intestine
|
GalNAc(a1-3)[Fuc(a1-2)]Gal(b1-4)GlcNAc(b1-3)Gal(b1-4)Glc(b1-1)Cer
|
Not Binding
|
||
|
Unknown
|
A6 type 2 glycosphingolipid (A6-2)
|
Oligoglycosylceramides
|
Human erythrocytes
|
GalNAc(a1-3)[Fuc(a1-2)]Gal(b1-4)GlcNAc(b1-3)Gal(b1-4)Glc(b1-1)Cer
|
Not Binding
|
||
|
B subunit
|
A6 type 2 glycosphingolipid (A6-2)
|
Oligoglycosylceramides
|
Dog small intestine
|
GalNAc(a1-3)[Fuc(a1-2)]Gal(b1-4)GlcNAc(b1-3)Gal(b1-4)Glc(b1-1)Cer
|
Not Binding
|
||
|
Unknown
|
A6 type 2 glycosphingolipid (A6-2)
|
Oligoglycosylceramides
|
Dog small intestine
|
GalNAc(a1-3)[Fuc(a1-2)]Gal(b1-4)GlcNAc(b1-3)Gal(b1-4)Glc(b1-1)Cer
|
Not Binding
|
||
|
Lectin-hemagglutinin adhesins
|
Acid glycosphingolipids
|
Acidic Glycosphingolipids
|
Human granulocytes
|
Binding
|
|||
|
Lectin-hemagglutinin adhesins
|
Acid glycosphingolipids
|
Acidic Glycosphingolipids
|
Human granulocytes
|
Binding
|
|||
|
Lectin-hemagglutinin adhesins
|
Acid glycosphingolipids
|
Acidic Glycosphingolipids
|
Human granulocytes
|
Binding
|
|||
|
HPNAP (neutrophil-activating protein of H. pylori)
|
Acid glycosphingolipids
|
Acidic Glycosphingolipids
|
Human neutrophil granulocytes
|
Binding
|
|||
|
Lectin-hemagglutinin adhesins
|
Acid glycosphingolipids
|
Acidic Glycosphingolipids
|
human granulocytes
|
Not Binding
|
Displaying entries 1 - 10 of 1840 in total
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International Collaboration
GlyCosmos is a member of the GlySpace Alliance together with GlyGen and Glycomics@ExPASy.
Acknowledgements
Supported by JST NBDC Grant Number JPMJND2204
Partly supported by NIH Common Fund Grant #1U01GM125267-01
