GlyCosmos Pathways

Integrated of pathway data, containing glycoproteins and glycans obtained from Reactome and the Metabolism of carbohydrates in Escherichia coli O-antigens obtained from ECODAB. Search by pathway name, species, and protein name.

Source Last Updated
Reactome March 20, 2024
ECODAB April 1, 2019
Displaying entries 326 - 350 of 557 in total
Pathway Name Protein Name ▲ UniProt ID Gene Symbol Organism GlyTouCan ID
Cyclin E associated events during G1/S transition
  • CABLES1
  • CCNE1
  • CCNE2
  • CCNH
  • CDC25A
  • CDK2
  • CDK7
  • CDKN1A
  • CDKN1B
  • CDKN2
  • MNAT1
  • RB1
  • WEE1
Bos taurus (cattle)
Cyclin A:Cdk2-associated events at S phase entry
  • CABLES1
  • CCNA1
  • CCNA2
  • CCNH
  • CDC25A
  • CDC25B
  • CDK2
  • CDK7
  • CDKN1A
  • CDKN1B
  • CDKN2
  • FZR1
  • MNAT1
  • RB1
  • WEE1
Bos taurus (cattle)
p53-Dependent G1 DNA Damage Response
  • CCNA1
  • CCNA2
  • CCNE1
  • CCNE2
  • CDK2
  • CDKN1A
  • CDKN1B
  • CDKN2
Bos taurus (cattle)
Assembly of collagen fibrils and other multimeric structures
  • COL10A1
  • COL11A1
  • COL11A2
  • COL1A1
  • COL1A2
  • COL27A1
  • COL2A1
  • COL3A1
  • COL4A1
  • COL5A1
  • COL5A3
  • COL6A1
  • COL6A2
  • COL6A3
  • COL6A5
  • COL6A6
  • COL8A1
  • COL8A2
Bos taurus (cattle)
Collagen chain trimerization
  • COL10A1
  • COL11A1
  • COL11A2
  • COL12A1
  • COL13A1
  • COL14A1
  • COL16A1
  • COL17A1
  • COL18A1
  • COL1A1
  • COL1A2
  • COL20A1
  • COL23A1
  • COL26A1
  • COL27A1
  • COL28A1
  • COL2A1
  • COL3A1
  • COL5A1
  • COL5A3
  • COL6A1
  • COL6A2
  • COL6A3
  • COL6A5
  • COL6A6
  • COL8A1
  • COL8A2
Bos taurus (cattle)
RHOBTB1 GTPase cycle
  • BRE1A
  • CCT2
  • CCT7
  • COPS2
  • COPS4
  • CPSF7
  • CUL3
  • GPS1
  • HNRPC
  • LOC782101
  • MYO6
  • PDE5
  • PDE5A
  • RBBP6
  • RBMX
  • RHOBTB1
  • RNF20
  • ROCK1
  • ROCK2
  • SFRS10
  • SRRM1
  • STK38
  • TRA2B
  • TXNL1
  • VIM
Bos taurus (cattle)
CREB3 factors activate genes
  • CREB3
  • CREB3L3
  • CREBRF
  • MBTPS1
  • MBTPS2
Bos taurus (cattle)
Erythropoietin activates RAS
  • CRKL
  • EPO
  • EPOR
  • GRB2
  • IRS2
  • JAK2
  • LYN
  • RAPGEF1
  • SHC1
  • VAV1
Bos taurus (cattle)
Leukotriene receptors
  • CYSLTR1
  • CYSLTR2
  • GPR17
  • LTB4R
  • LTB4R2
Bos taurus (cattle)
Apoptotic cleavage of cell adhesion proteins
  • CASP3
  • CDH1
  • CTNNB1
  • DSG1
  • DSG2
  • DSG3
  • DSP
  • OCLN
  • PKP1
  • TJP1
  • TJP2
Bos taurus (cattle)
Phase 0 - rapid depolarisation
  • CACNA1C
  • CACNA2D2
  • CACNB1
  • CACNB2
  • CACNG4
  • CACNG6
  • CACNG7
  • CACNG8
  • CALM
  • CAMK2A
  • CAMK2B
  • CAMK2D
  • FGF12
  • FGF13
  • FGF14
  • RANGRF
  • SCN11A
  • SCN1A
  • SCN1B
  • SCN2B
  • SCN3A
  • SCN3B
  • SCN4B
  • SCN5A
  • SCN8A
  • SCN9A
Bos taurus (cattle)
Phase 2 - plateau phase
  • CACNA1C
  • CACNA2D2
  • CACNB1
  • CACNB2
  • CACNG4
  • CACNG6
  • CACNG7
  • CACNG8
  • KCNE1
  • KCNE1L
  • KCNE2
  • KCNE3
  • KCNE4
  • KCNE5
  • KCNQ1
Bos taurus (cattle)
Ca activated K+ channels
  • KCNMA
  • KCNMA1
  • KCNMB1
  • KCNMB2
  • KCNMB3
  • KCNMB4
  • KCNN1
  • KCNN2
  • KCNN3
Bos taurus (cattle)
Dopamine Neurotransmitter Release Cycle
  • CASK
  • CPLX1
  • LIN7A
  • LIN7B
  • LIN7C
  • PPFIA1
  • PPFIA2
  • PPFIA3
  • PPFIA4
  • RAB3A
  • RIMS1
  • SLC18A2
  • SNAP25
  • STX1A
  • STXBP1
  • SYB2
  • SYN1
  • SYT1
  • UNC13B
  • UNC18A
  • VAMP2
Bos taurus (cattle)
Interferon gamma signaling
  • CAMK2A
  • CAMK2B
  • CAMK2D
  • ERK2
  • IFNG
  • IFNGR1
  • IFNGR2
  • JAK1
  • JAK2
  • MAPK1
  • MAPK3
  • PRKCD
  • PRKM1
  • PTPN6
  • SOCS1
  • SOCS3
  • STAT1
  • YB1
  • YBX1
Bos taurus (cattle)
Inactivation, recovery and regulation of the phototransduction cascade
  • CALM
  • CAMKMT
  • CNCG
  • CNCG1
  • CNGA1
  • CNGB1
  • FNTA
  • FNTB
  • GCAP1
  • GNAT1
  • GNB5
  • GNGT1
  • GRK1
  • GRK4
  • GRK7
  • GUCA1
  • GUCA1A
  • GUCA1B
  • GUCY2D
  • GUCY2F
  • LOC786620
  • METAP1
  • METAP2
  • NMT1
  • NMT2
  • PDE6A
  • PDE6B
  • PDE6G
  • PDEG
  • PPEF1
  • R9AP
  • RCV1
  • RCVRN
  • RGS9
  • RGS9BP
  • RHO
  • RHOK
  • SAG
Bos taurus (cattle)
Interleukin-35 Signalling
  • CANX
  • EBI3
  • IL12A
  • IL12RB2
  • IL27RA
  • IL6ST
  • JAK1
  • JAK2
  • STAT1
  • STAT3
  • STAT4
  • TYK2
  • canx
Bos taurus (cattle)
Class A/1 (Rhodopsin-like receptors)
  • CMLKR1
  • CNR1
  • CNR2
  • GPBAR1
  • GPR132
  • GPR18
  • GPR183
  • GPR35
  • GPR39
  • GPR4
  • GPR65
  • GPR68
  • MTNR1A
  • MTNR1B
  • OXGR1
  • PAFR
  • PTAFR
  • SUCNR1
  • TGR5
Bos taurus (cattle)
Reversible hydration of carbon dioxide
  • CA1
  • CA12
  • CA13
  • CA14
  • CA2
  • CA3
  • CA4
  • CA5A
  • CA5B
  • CA6
  • CA9
Bos taurus (cattle)
Digestion of dietary lipid
  • CEL
  • CLPS
  • LIPF
  • PNLIP
  • PNLIPRP2
  • PNLIPRP3
Bos taurus (cattle)
IL-6-type cytokine receptor ligand interactions
  • CLCF1
  • CNTF
  • CNTFR
  • CTF1
  • IL6ST
  • JAK1
  • JAK2
  • LIF
  • LIFR
  • OSM
  • TYK2
Bos taurus (cattle)
Cooperation of PDCL (PhLP1) and TRiC/CCT in G-protein beta folding
  • CCT2
  • CCT3
  • CCT4
  • CCT5
  • CCT6A
  • CCT6B
  • CCT7
  • CCT8
  • CK2A1
  • CK2N
  • CSNK2A1
  • CSNK2A2
  • CSNK2B
  • GNA11
  • GNA14
  • GNA15
  • GNAQ
  • GNB1
  • GNB2
  • GNB3
  • GNB4
  • GNB5
  • GNG10
  • GNG11
  • GNG12
  • GNG13
  • GNG2
  • GNG3
  • GNG4
  • GNG5
  • GNG7
  • GNG8
  • GNGT1
  • GNGT12
  • GNGT2
  • GNGT3
  • GNGT5
  • GNGT7
  • GNGT8
  • PDCL
  • RGS11
  • RGS6
  • RGS7
  • RGS9
  • TCP1
Bos taurus (cattle)
Synthesis of PC
  • ABHD3
  • CEPT1
  • CHAT
  • CHKA
  • CHKB
  • CHPT1
  • CK2A1
  • CK2N
  • CPT1
  • CSNK2A1
  • CSNK2A2
  • CSNK2B
  • CTL2
  • CTL3
  • CTL4
  • LPCAT1
  • LPIN1
  • LPIN2
  • LPIN3
  • MFSD2
  • MFSD2A
  • PCTP
  • PCYT1A
  • PCYT1B
  • PEMT
  • PEMT2
  • PHOSPHO1
  • SLC44A1
  • SLC44A2
  • SLC44A3
  • SLC44A4
  • SLC44A5
  • STARD10
  • STARD2
  • STARD7
  • TPPT1
Bos taurus (cattle)
Condensation of Prometaphase Chromosomes
  • CK2A1
  • CK2N
  • CSNK2A1
  • CSNK2A2
  • CSNK2B
  • NCAPD2
  • NCAPG
  • NCAPH
  • SMC2
  • SMC4
Bos taurus (cattle)
WNT mediated activation of DVL
  • CK2A1
  • CK2N
  • CSNK1E
  • CSNK2A1
  • CSNK2A2
  • CSNK2B
  • DVL1
  • DVL2
  • DVL3
  • PIP5K1B
Bos taurus (cattle)

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GlyCosmos is a member of the GlySpace Alliance together with GlyGen and Glycomics@ExPASy.

Acknowledgements

Supported by JST NBDC Grant Number JPMJND2204

Partly supported by NIH Common Fund Grant #1U01GM125267-01


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Last updated: August 19, 2024