GlyCosmos Pathways

Integrated of pathway data, containing glycoproteins and glycans obtained from Reactome and the Metabolism of carbohydrates in Escherichia coli O-antigens obtained from ECODAB. Search by pathway name, species, and protein name.

Source Last Updated
Reactome March 20, 2024
ECODAB April 1, 2019
Displaying entries 501 - 525 of 557 in total
Pathway Name Protein Name UniProt ID Gene Symbol Organism GlyTouCan ID ▼
Platelet Aggregation (Plug Formation)
  • F2
  • GP1BB
  • GP5
  • GP9
  • VWF
Bos taurus (cattle)
CD22 mediated BCR regulation
  • CD22
  • CD79A
  • CD79B
  • IGA
  • LYN
  • MB-1
  • PTPN6
Bos taurus (cattle)
Formation of the cornified envelope
  • CASP14
  • CDSN
  • CELA2A
  • DSC1
  • DSC2
  • DSC3
  • DSG1
  • DSG2
  • DSG3
  • DSG4
  • DSP
  • EVPL
  • JUP
  • KLK12
  • KLK13
  • KLK14
  • KLK5
  • KLK8
  • KLNC
  • LIPJ
  • LIPK
  • LIPM
  • LIPN
  • PI3
  • PKP1
  • PKP4
  • PPL
  • RPTN
  • SPINK5
  • SPINK6
  • SPINK9
  • TCHH
  • TGM1
Bos taurus (cattle)
Switching of origins to a post-replicative state
  • CDT1
  • GMNN
  • MCM2
  • MCM3
  • MCM4
  • MCM5
  • MCM6
  • MCM7
Bos taurus (cattle)
Caspase-mediated cleavage of cytoskeletal proteins
  • ADD1
  • CASP3
  • CASP6
  • CASP7
  • CASP8
  • GAS2
  • GSN
  • PLEC
  • SORBS2
  • SPTAN1
  • VIM
Bos taurus (cattle)
Activation of NF-kappaB in B cells
  • BCL10
  • CARD11
  • CHUK
  • CUL1
  • FBXW11
  • IKBKB
  • IKBKG
  • IKKA
  • MALT1
  • NEMO
  • NFKB1
  • NFKBIA
  • NFKBIB
  • NFKBIE
  • PRKCB
  • PRKCB1
  • PSMA1
  • PSMA2
  • PSMA3
  • PSMA4
  • PSMA5
  • PSMA6
  • PSMA7
  • PSMA8
  • PSMB1
  • PSMB10
  • PSMB2
  • PSMB3
  • PSMB4
  • PSMB5
  • PSMB6
  • PSMB7
  • PSMB8
  • PSMB9
  • PSMC2
  • PSMC3
  • PSMC4
  • PSMC5
  • PSMC6
  • PSMD1
  • PSMD11
  • PSMD12
  • PSMD13
  • PSMD14
  • PSMD2
  • PSMD3
  • PSMD4
  • PSMD5
  • PSMD6
  • PSMD7
  • PSMD8
  • PSMD9
  • PSME1
  • PSME2
  • PSME4
  • PSMF1
  • REL
  • RELA
  • RPS27A
  • SKP1
  • SKP1A
  • SUG1
  • TRAP2
  • UBA52
  • UBA80
  • UBB
  • UBC
  • UBCEP1
  • UBCEP2
  • bIkBa
Bos taurus (cattle)
Zinc influx into cells by the SLC39 gene family
  • SLC39A1
  • SLC39A14
  • SLC39A2
  • SLC39A4
  • SLC39A6
  • SLC39A7
  • SLC39A8
  • ZIP1
  • ZIP4
Bos taurus (cattle)
Downregulation of TGF-beta receptor signaling
  • BAMBI
  • MTMR4
  • RPS27A
  • SMAD2
  • SMAD3
  • SMAD7
  • SMURF2
  • STRAP
  • STUB1
  • TGFB1
  • TGFBR1
  • TGFBR2
  • UBA52
  • UBA80
  • UBB
  • UBC
  • UBCEP1
  • UBCEP2
Bos taurus (cattle)
Dopamine Neurotransmitter Release Cycle
  • CASK
  • CPLX1
  • LIN7A
  • LIN7B
  • LIN7C
  • PPFIA1
  • PPFIA2
  • PPFIA3
  • PPFIA4
  • RAB3A
  • RIMS1
  • SLC18A2
  • SNAP25
  • STX1A
  • STXBP1
  • SYB2
  • SYN1
  • SYT1
  • UNC13B
  • UNC18A
  • VAMP2
Bos taurus (cattle)
Acyl chain remodelling of PE
  • ABHD4
  • CPLA2
  • HRASLS5
  • LOC613966
  • LPCAT3
  • LPCAT4
  • MBOAT1
  • MBOAT2
  • PLA2G12A
  • PLA2G16
  • PLA2G1B
  • PLA2G2A
  • PLA2G2D1
  • PLA2G2E
  • PLA2G3
  • PLA2G4
  • PLA2G4A
  • PLA2G4D
  • PLA2G4E
  • PLA2G4F
  • PLA2G6
  • PLA2R1
  • PLAAT1
  • PLAAT5
  • PLBD1
  • PNPLA8
Bos taurus (cattle)
Phospholipase C-mediated cascade; FGFR3
  • AFGF
  • FGF1
  • FGF16
  • FGF17
  • FGF18
  • FGF2
  • FGF20
  • FGF23
  • FGF4
  • FGF4A
  • FGF4C
  • FGF5
  • FGF6A
  • FGF8
  • FGF9
  • FGFA
  • FGFR3
  • Fgf4
  • HBGF-1
  • PLCG1
Bos taurus (cattle)
Erythrocytes take up carbon dioxide and release oxygen
  • AQP1
  • CA1
  • CA2
  • CA4
  • CYB5R1
  • CYB5R2
  • CYB5R4
  • CYB5RL
  • HBA
  • HBB
  • RHAG
  • SLC4A1
Bos taurus (cattle)
Chylomicron remodeling
  • APOA1
  • APOA2
  • APOA4
  • APOA5
  • APOB
  • APOC2
  • APOC3
  • APOE
  • GPIHBP1
  • LPL
Bos taurus (cattle)
SHC-mediated cascade:FGFR2
  • AFGF
  • FGF1
  • FGF10
  • FGF16
  • FGF17
  • FGF18
  • FGF2
  • FGF20
  • FGF23
  • FGF3
  • FGF4
  • FGF4A
  • FGF4C
  • FGF5
  • FGF5B
  • FGF5C
  • FGF6
  • FGF6A
  • FGF7
  • FGF7B
  • FGF8
  • FGF9
  • FGFA
  • FGFR2
  • Fgf4
  • GRB2
  • HBGF-1
  • KRAS
  • NRAS
  • SHC1
  • SOS1
Bos taurus (cattle)
Atorvastatin ADME
  • ABCB1
  • ABCC2
  • CYP3A28
  • CYP3A4
  • CYP3A5
  • CYP3A74
  • CYP3A76
  • PON1
  • PON3
  • SLCO1B3
  • SLCO2B1
  • UGT1A6
Bos taurus (cattle)
Regulation of cholesterol biosynthesis by SREBP (SREBF)
  • KPNB1
  • MBTPS1
  • MBTPS2
  • RAN
  • SCAP
  • SREBF1
  • SREBF2
Bos taurus (cattle)
RUNX1 interacts with co-factors whose precise effect on RUNX1 targets is not known
  • ACTL6
  • ACTL6A
  • ACTL6B
  • ARID1A
  • ARID1B
  • AUTS2
  • BAF190A
  • BAF47
  • BAF53B
  • BMI1
  • BRG1
  • CBFB
  • CBX2
  • CBX4
  • CBX6
  • CBX8
  • CK2A1
  • CK2N
  • CSNK2A1
  • CSNK2A2
  • CSNK2B
  • EP300
  • HIPK2
  • PBRM1
  • PCGF4
  • PCGF5
  • PHC1
  • PHC2
  • PHC3
  • RNF2
  • RUNX1
  • RYBP
  • SCMH1
  • SMARCA2
  • SMARCA4
  • SMARCB1
  • SMARCC1
  • SMARCD1
  • SMARCD2
  • SMARCD3
  • SMARCE1
  • SNF2B
  • SNF2L4
  • YAF2
Bos taurus (cattle)
HSP90 chaperone cycle for SHRs
  • ACTR10
  • ACTR1A
  • AR
  • ARP10
  • CAPZA1
  • CAPZA2
  • CAPZA3
  • DCTN1
  • DCTN2
  • DCTN3
  • DCTN4
  • DCTN5
  • DCTN6
  • DNAJA1
  • DNAJA2
  • DNAJA4
  • DNAJB1
  • DNCL1
  • DYNC1H1
  • DYNC1I1
  • DYNC1LI1
  • DYNC1LI2
  • DYNLL1
  • DYNLL2
  • FKBP4
  • FKBP5
  • HSC70
  • HSP70-1
  • HSP90A
  • HSP90AA1
  • HSP90AB1
  • HSPA1A
  • HSPA1L
  • HSPA2
  • HSPA8
  • HSPC3
  • HSPCA
  • HSPCB
  • NR3C1
  • NR3C2
  • PGR
  • PTGES3
  • STIP1
Bos taurus (cattle)
Transport of bile salts and organic acids, metal ions and amine compounds
  • CTL2
  • CTL3
  • CTL4
  • SLC14A1
  • SLC14A2
  • SLC44A1
  • SLC44A2
  • SLC44A3
  • SLC44A4
  • SLC44A5
  • SLC47A2
  • SLC5A7
  • TPPT1
  • UT-B
Bos taurus (cattle)
Heme signaling
  • APOA1
  • APOB
  • BACH1
  • HBA
  • HBB
  • HCP1
  • LY96
  • MAFK
  • MD-2
  • PCFT
  • PGRMC2
  • SLC46A1
  • TLR4
  • XPO1
Bos taurus (cattle)
GABA synthesis, release, reuptake and degradation
  • CPLX1
  • DNAJC5
  • GAD1
  • GAD2
  • HSC70
  • HSPA8
  • RAB3A
  • RIMS1
  • SLC32A1
  • SNAP25
  • STX1A
  • STXBP1
  • SYB2
  • SYT1
  • UNC18A
  • VAMP2
Bos taurus (cattle)
Metal sequestration by antimicrobial proteins
  • CAAF2
  • LCN2
  • LOC786350
  • LTF
  • S100A7
  • S100A8
  • S100A9
Bos taurus (cattle)
Activation of G protein gated Potassium channels
  • GABBR1
  • GABBR2
  • GIRK1
  • GIRK4
  • GNB1
  • GNB2
  • GNB3
  • GNB4
  • GNB5
  • GNG10
  • GNG11
  • GNG12
  • GNG13
  • GNG2
  • GNG3
  • GNG4
  • GNG5
  • GNG7
  • GNG8
  • GNGT1
  • GNGT12
  • GNGT2
  • GNGT3
  • GNGT5
  • GNGT7
  • GNGT8
  • IRK1
  • KCNJ10
  • KCNJ12
  • KCNJ15
  • KCNJ16
  • KCNJ2
  • KCNJ3
  • KCNJ4
  • KCNJ5
  • KCNJ6
Bos taurus (cattle)
Gamma carboxylation, hypusinylation, hydroxylation, and arylsulfatase activation
  • F8
  • FN3KRP
  • ICMT
  • TPST1
  • TPST2
Bos taurus (cattle)
ROS and RNS production in phagocytes
  • ATP6A1
  • ATP6B1
  • ATP6B2
  • ATP6C
  • ATP6D
  • ATP6E
  • ATP6G
  • ATP6G1
  • ATP6H
  • ATP6N1B
  • ATP6S14
  • ATP6V0A1
  • ATP6V0A2
  • ATP6V0A4
  • ATP6V0B
  • ATP6V0C
  • ATP6V0D1
  • ATP6V0D2
  • ATP6V0E
  • ATP6V0E1
  • ATP6V0E2
  • ATP6V1A
  • ATP6V1A1
  • ATP6V1B1
  • ATP6V1B2
  • ATP6V1C1
  • ATP6V1C2
  • ATP6V1E1
  • ATP6V1E2
  • ATP6V1F
  • ATP6V1G1
  • ATP6V1G2
  • ATP6V1G3
  • ATP6V1H
  • CYBA
  • CYBB
  • HVCN1
  • LOC101904667
  • NCF1
  • NCF2
  • NCF4
  • NOS1
  • NOS2
  • NOS3
  • RAC2
  • SLC11A1
  • TCIRG1
  • VATC
  • VATF
  • VPATPD
Bos taurus (cattle)

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GlyCosmos is a member of the GlySpace Alliance together with GlyGen and Glycomics@ExPASy.

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Last updated: August 19, 2024