GlyCosmos Pathways

Integrated of pathway data, containing glycoproteins and glycans obtained from Reactome and the Metabolism of carbohydrates in Escherichia coli O-antigens obtained from ECODAB. Search by pathway name, species, and protein name.

Source Last Updated
Reactome March 20, 2024
ECODAB April 1, 2019
Displaying entries 501 - 525 of 557 in total
Pathway Name Protein Name ▲ UniProt ID Gene Symbol Organism GlyTouCan ID
Signaling by Type 1 Insulin-like Growth Factor 1 Receptor (IGF1R)
  • IGF1
  • IGF1R
  • IGF2
Bos taurus (cattle)
TP53 Regulates Transcription of Death Receptors and Ligands
  • IGFBP3
  • TMEM219
Bos taurus (cattle)
Laminin interactions
  • ITGA3
  • ITGA6
  • ITGA7
  • ITGB1
  • ITGB4
  • LAMA4
  • MEGF6
  • NID1
Bos taurus (cattle)
Regulation of IFNA/IFNB signaling
  • IF1AG1
  • IF1AG8
  • IFNAC
  • IFNAR
  • IFNAR1
  • IFNAR2
  • JAK1
  • LOC100335490
  • LOC523244
  • LOC618947
  • LOC783912
  • PTPN1
  • PTPN11
  • PTPN6
  • STAT1
  • STAT2
  • TYK2
Bos taurus (cattle)
IFNG signaling activates MAPKs
  • ERK2
  • IFNG
  • IFNGR1
  • IFNGR2
  • JAK1
  • JAK2
  • MAPK1
  • MAPK3
  • PRKM1
Bos taurus (cattle)
Regulation of IFNG signaling
  • IFNG
  • IFNGR1
  • IFNGR2
  • JAK1
  • JAK2
  • PIAS1
  • PTPN2
  • SOCS1
  • SOCS3
  • STAT1
Bos taurus (cattle)
Interleukin-12 signaling
  • IL12A
  • IL12B
  • IL12RB1
  • IL12RB2
  • JAK1
  • JAK2
  • P4HB
  • STAT4
  • TYK2
Bos taurus (cattle)
Tight junction interactions
  • F11R
  • JAM1
  • PARD3
  • PARD6A
  • PARD6B
  • PARD6G
  • PRKCI
Bos taurus (cattle)
Voltage gated Potassium channels
  • EAG
  • KCNA10
  • KCNA2
  • KCNA3
  • KCNA4
  • KCNA5
  • KCNA6
  • KCNA7
  • KCNAB1
  • KCNAB2
  • KCNAB3
  • KCNB1
  • KCNB2
  • KCNC1
  • KCNC3
  • KCNC4
  • KCND1
  • KCND2
  • KCND3
  • KCNF1
  • KCNG1
  • KCNG2
  • KCNG3
  • KCNG4
  • KCNH1
  • KCNH2
  • KCNH3
  • KCNH4
  • KCNH5
  • KCNH6
  • KCNH7
  • KCNH8
  • KCNQ1
  • KCNQ2
  • KCNQ3
  • KCNQ4
  • KCNQ5
  • KCNS1
  • KCNS2
  • KCNV2
  • KVB2
Bos taurus (cattle)
Phase 1 - inactivation of fast Na+ channels
  • KCND1
  • KCND2
  • KCND3
  • KCNIP1
  • KCNIP2
  • KCNIP3
  • KCNIP4
Bos taurus (cattle)
Events associated with phagocytolytic activity of PMN cells
  • LPO
  • MPO
Bos taurus (cattle)
Metal sequestration by antimicrobial proteins
  • CAAF2
  • LCN2
  • LOC786350
  • LTF
  • S100A7
  • S100A8
  • S100A9
Bos taurus (cattle)
Amino acid transport across the plasma membrane
  • ASCT2
  • B0AT2
  • LAT4
  • NTT73
  • ORNT3
  • SATT
  • SLC16A10
  • SLC1A4
  • SLC1A5
  • SLC25A29
  • SLC36A1
  • SLC36A2
  • SLC36A4
  • SLC38A1
  • SLC38A2
  • SLC38A3
  • SLC38A4
  • SLC38A5
  • SLC3A1
  • SLC3A2
  • SLC43A1
  • SLC43A2
  • SLC6A15
  • SLC6A18
  • SLC6A19
  • SLC6A20
  • SLC6A6
  • SLC7A1
  • SLC7A10
  • SLC7A11
  • SLC7A3
  • SLC7A5
  • SLC7A6
  • SLC7A7
  • SLC7A8
  • SLC7A9
  • SNAT2
  • SNAT5
Bos taurus (cattle)
Receptor-type tyrosine-protein phosphatases
  • LOC101901895
  • LRRC4B
  • NTRK3
  • PPFIA1
  • PPFIA2
  • PPFIA3
  • PPFIA4
  • PPFIBP1
  • PPFIBP2
  • PTPRD
  • PTPRF
  • PTPRS
  • SLITRK1
  • SLITRK2
  • SLITRK3
  • SLITRK4
  • SLITRK5
  • SLITRK6
Bos taurus (cattle)
Opsins
  • BCP
  • OPN1LW
  • OPN1SW
  • OPN4
  • OPN5
  • RCP
  • RGR
  • RHO
  • RRH
Bos taurus (cattle)
MyD88-independent TLR4 cascade
  • CD14
  • LY96
  • MD-2
  • SARM1
  • TICAM2
  • TLR4
  • TRAM
Bos taurus (cattle)
Lysosphingolipid and LPA receptors
  • EDG1
  • GPR92
  • LPAR1
  • LPAR2
  • LPAR3
  • LPAR5
  • PLPPR1
  • PLPPR2
  • PLPPR3
  • PLPPR4
  • PLPPR5
  • S1PR1
  • S1PR2
  • S1PR3
  • S1PR5
Bos taurus (cattle)
Arachidonate production from DAG
  • ABHD12
  • ABHD6
  • DAGLA
  • DAGLB
Bos taurus (cattle)
Crosslinking of collagen fibrils
  • BMP1
  • LOX
  • LOXL1
  • LOXL2
  • LOXL3
  • LOXL4
  • PCOLCE
  • PXDN
  • TLL1
  • TLL2
Bos taurus (cattle)
Zinc influx into cells by the SLC39 gene family
  • SLC39A1
  • SLC39A14
  • SLC39A2
  • SLC39A4
  • SLC39A6
  • SLC39A7
  • SLC39A8
  • ZIP1
  • ZIP4
Bos taurus (cattle)
Opioid Signalling
  • OPRM1
  • PDYN
  • POMC
Bos taurus (cattle)
TRP channels
  • MCOLN1
  • MCOLN2
  • MCOLN3
  • TRP6
  • TRPA1
  • TRPC1
  • TRPC3
  • TRPC4
  • TRPC4AP
  • TRPC5
  • TRPC6
  • TRPC7
  • TRPM4
  • TRPM5
  • TRPM7
  • TRPM8
  • TRPV1
  • TRPV2
  • TRPV3
  • TRPV4
  • TRPV5
  • TRPV6
Bos taurus (cattle)
Muscarinic acetylcholine receptors
  • CHRM1
  • CHRM2
  • CHRM3
  • CHRM5
Bos taurus (cattle)
TFAP2 (AP-2) family regulates transcription of cell cycle factors
  • KDM5B
  • MYC
  • TFAP2C
Bos taurus (cattle)
Neurotransmitter release cycle
  • NAAA
Bos taurus (cattle)

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Supported by JST NBDC Grant Number JPMJND2204

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Last updated: August 19, 2024