GlyCosmos Pathways

Integrated of pathway data, containing glycoproteins and glycans obtained from Reactome and the Metabolism of carbohydrates in Escherichia coli O-antigens obtained from ECODAB. Search by pathway name, species, and protein name.

Source Last Updated
Reactome March 20, 2024
ECODAB April 1, 2019
Displaying entries 126 - 150 of 268 in total
Pathway Name Protein Name ▼ UniProt ID Gene Symbol Organism GlyTouCan ID
Dermatan sulfate biosynthesis
  • BCAN
  • BGN
  • CSPG4
  • CSPG5
  • DCN
  • DCN1C
  • DSE
  • DSEL
  • NCAN
  • UST
  • VCAN
Canis familiaris (dog)
Chondroitin sulfate biosynthesis
  • BCAN
  • BGN
  • CHPF
  • CHPF2
  • CHST11
  • CHST12
  • CHST13
  • CHST3
  • CHST7
  • CHST9
  • CHSY1
  • CHSY3
  • CSGALNACT1
  • CSGALNACT2
  • CSPG4
  • CSPG5
  • DCN
  • DCN1C
  • NCAN
  • VCAN
Canis familiaris (dog)
Hyaluronan uptake and degradation
  • CD44
  • CHP1
  • GUSB
  • HEXA
  • HEXB
  • HMMR
  • HYAL1
  • LYVE1
  • SLC9A1
  • STAB2
Canis familiaris (dog)
Gluconeogenesis
  • ALDOA
  • ALDOB
  • ALDOC
  • ENO2
  • ENO3
  • ENO4
  • FBP1
  • FBP2
  • G6PC1
  • G6PC2
  • G6PC3
  • GAPDH
  • GAPDHS
  • GPI
  • LOC106558132
  • PC
  • PCK1
  • PCK2
  • PGAM1
  • PGAM2
  • PGK1
  • PGK2
  • SLC37A1
  • SLC37A2
  • SLC37A4
  • TPI1
Canis familiaris (dog)
DAP12 interactions
  • B2M
  • CD300E
  • CD94
  • CLEC5A
  • KLRD1
  • LOC119863908
  • LOC119866326
  • LOC119873404
  • LOC476396
  • LOC484343
  • SIGLEC15
  • SIRPA
  • TREM1
  • TYROBP
Canis familiaris (dog)
O-linked glycosylation
  • AGO61
  • B3GALNT2
  • B4GAT1
  • DAG1
  • GTDC2
  • LARGE1
  • LARGE2
  • POMGNT1
  • POMGNT2
  • POMK
  • POMT1
  • POMT2
Canis familiaris (dog)
Lactose synthesis
  • B4GALT1
  • LALBA
  • LYZG
  • SLC2A1
Canis familiaris (dog)
Glycosphingolipid biosynthesis
  • A4GALT
  • B3GALNT1
  • B3GALT4
  • B4GALNT1
  • B4GALT5
  • B4GALT6
  • CERK
  • FUT2
  • ST3GAL2
  • ST3GAL3
  • ST3GAL5
  • ST6GALNAC5
  • ST6GALNAC6
  • ST8SIA5
  • UGCG
  • UGT8
Canis familiaris (dog)
Integrin cell surface interactions
  • BSG
  • CD44
  • CD47
  • CDH1
  • COL13A1
  • COL16A1
  • COL18A1
  • COL4A1
  • COL4A2
  • COL4A3
  • COL4A4
  • COL9A1
  • COL9A2
  • COL9A3
  • COMP
  • F11R
  • FBN1
  • FN1
  • IBSP
  • ICAM1
  • ICAM2
  • ICAM3
  • ICAM4
  • ICAM5
  • ITGA1
  • ITGA10
  • ITGA11
  • ITGA2
  • ITGA2B
  • ITGA3
  • ITGA4
  • ITGA5
  • ITGA6
  • ITGA8
  • ITGA9
  • ITGAD
  • ITGAE
  • ITGAL
  • ITGAM
  • ITGAV
  • ITGB1
  • ITGB2
  • ITGB3
  • ITGB5
  • ITGB6
  • ITGB7
  • ITGB8
  • JAM3
  • LOC119867047
  • LUM
  • MADCAM1
  • PECAM1
  • SEBOX
  • SPP1
  • THBS1
  • TNC
  • VCAM1
Canis familiaris (dog)
TNFR1-induced proapoptotic signaling
  • BIRC2
  • BIRC3
  • BIRC4
  • CYLD
  • IKBKE
  • IRF9
  • MIB2
  • RBCK1
  • RIPK1
  • SPATA2
  • TBK1
  • TNF
  • TNFA
  • TNFRSF1A
  • TNFSF2
  • TRADD
  • TRAF2
  • XIAP
Canis familiaris (dog)
TNFR1-induced NF-kappa-B signaling pathway
  • BIRC2
  • BIRC3
  • BIRC4
  • CHUK
  • CYLD
  • IKBKB
  • IKBKG
  • IRF9
  • MAP3K7
  • OPTN
  • OTUD1
  • OTUD7B
  • RACK1
  • RBCK1
  • RIPK1
  • SPATA2
  • TAB1
  • TAB2
  • TAB3
  • TNF
  • TNFA
  • TNFAIP3
  • TNFRSF1A
  • TNFSF2
  • TRADD
  • TRAF2
  • USP2
  • USP21
  • USP4
  • XIAP
Canis familiaris (dog)
TNF receptor superfamily (TNFSF) members mediating non-canonical NF-kB pathway
  • BIRC2
  • BIRC3
  • CD40
  • CD40L
  • CD40LG
  • LTA
  • LTB
  • LTBR
  • MAP3K14
  • TNFB
  • TNFRSF11A
  • TNFRSF12A
  • TNFRSF13C
  • TNFSF1
  • TNFSF11
  • TNFSF12
  • TNFSF13B
  • TNFSF14
  • TNFSF5
  • TNLG1C
  • TNLG1D
  • TNLG7A
  • TRAF2
  • TRAF3
Canis familiaris (dog)
Regulation of TNFR1 signaling
  • BIRC2
  • BIRC3
  • BIRC4
  • CASP8
  • CASP9
  • CHUK
  • CLIP3
  • CYLD
  • IKBKB
  • IKBKE
  • IKBKG
  • IRF9
  • MADD
  • MIB2
  • OPTN
  • OTUD1
  • OTUD7B
  • RACK1
  • RBCK1
  • RIPK1
  • RPS27A
  • SPATA2
  • SPPL2A
  • SPPL2B
  • STUB1
  • TAX1BP1
  • TBK1
  • TNF
  • TNFA
  • TNFAIP3
  • TNFRSF1A
  • TNFSF2
  • TRADD
  • TRAF2
  • UBA52
  • UBB
  • UBC
  • UBCEP2
  • UBE2D1
  • UBE2D2
  • UBE2D3
  • UBE2L3
  • ULK1
  • USP2
  • USP21
  • USP4
  • XIAP
Canis familiaris (dog)
Antimicrobial peptides
  • BPI
  • BPIFA1
  • BPIFA2
  • BPIFB1
  • BPIFB2
  • BPIFB4
  • BPIFB6
  • CAMP
  • CHGA
  • CTSG
  • ELA2
  • ELANE
  • GNLY
  • LEAP2
  • LOC100687463
  • PGLYRP1
  • PGLYRP2
  • PI3
  • PRSS2
  • REG3A
Canis familiaris (dog)
PI5P, PP2A and IER3 Regulate PI3K/AKT Signaling
  • AILIM
  • AREG
  • BTC
  • CD19
  • CD28
  • CD80
  • CD86
  • EGF
  • EGFR
  • EPGN
  • ERBB2
  • ERBB3
  • ERBB4
  • EREG
  • ESR1
  • ESR2
  • FGF1
  • FGF10
  • FGF16
  • FGF17
  • FGF18
  • FGF19
  • FGF20
  • FGF22
  • FGF23
  • FGF3
  • FGF3A
  • FGF4
  • FGF4B
  • FGF4C
  • FGF5
  • FGF6
  • FGF7
  • FGF7A
  • FGF7B
  • FGF8
  • FGF8B
  • FGF9
  • FGFR1
  • FGFR2
  • FGFR3
  • FGFR4
  • FLT3
  • FLT3LG
  • FRS2
  • FYN
  • GAB1
  • GAB2
  • GRB2
  • HBEGF
  • HGF
  • ICOS
  • IER3
  • IL1RAP
  • IL33
  • INS
  • INSR
  • IRAK1
  • IRAK4
  • IRS1
  • IRS2
  • KGF
  • KIT
  • KITLG
  • KL
  • KLB
  • LCK
  • LOC100856339
  • MAPK1
  • MAPK3
  • MET
  • MGF
  • MYD88
  • NRG1
  • NRG2
  • NRG3
  • PDGFA
  • PDGFB
  • PDGFRA
  • PDGFRB
  • PIK3AP1
  • PIK3CA
  • PIK3CB
  • PIK3CD
  • PIK3R1
  • PIK3R2
  • PIP4K2A
  • PIP4K2B
  • PIP4K2C
  • PIP5K1A
  • PIP5K1B
  • PIP5K1C
  • PPP2CA
  • PPP2CB
  • PPP2R1A
  • PPP2R1B
  • PPP2R5A
  • PPP2R5B
  • PPP2R5C
  • PPP2R5D
  • PPP2R5E
  • PTPN11
  • RAC1
  • RAC2
  • RHOG
  • SRC
  • STRN
  • TGFA
  • TRAF6
  • TRAT1
  • VAV1
Canis familiaris (dog)
Apoptotic execution phase
  • BCAP31
  • CASP8
  • DNM1L
  • LOC119868890
  • STK24
Canis familiaris (dog)
Immunoregulatory interactions between a Lymphoid and a non-Lymphoid cell
  • B2M
  • C3
  • CD160
  • CD19
  • CD1A8
  • CD1B
  • CD1D
  • CD200
  • CD226
  • CD247
  • CD300E
  • CD300LF
  • CD300LG
  • CD34
  • CD3D
  • CD3E
  • CD3G
  • CD40
  • CD40L
  • CD40LG
  • CD81
  • CD8A
  • CD8B
  • CD96
  • CD99
  • CLEC2B
  • CLEC2D
  • CLEC4G
  • CRTAM
  • CXADR
  • DLA-12
  • DLA-79
  • DLA88
  • FCGR1A
  • HCST
  • ICAM1
  • ICAM2
  • ICAM3
  • ICAM4
  • ICAM5
  • ITGA4
  • ITGAL
  • ITGB1
  • ITGB2
  • ITGB7
  • JAML
  • KLRB1
  • KLRF1
  • KLRK1
  • LAIR1
  • LOC100683099
  • LOC100686511
  • LOC102152131
  • LOC119863908
  • LOC119864110
  • LOC119864112
  • LOC119864113
  • LOC119864114
  • LOC119868795
  • LOC119873404
  • LOC119876868
  • LOC119881386
  • LOC475935
  • LOC476396
  • LOC483396
  • LOC484343
  • LOC606890
  • LOC609800
  • MADCAM1
  • MAG
  • NCR3
  • NCR3LG1
  • NECTIN2
  • NPDC1
  • OSCAR
  • PIANP
  • PILRA
  • PVR
  • SELL
  • SIGLEC1
  • SIGLEC11
  • SLAMF7
  • TNFSF5
  • TRAV29DV5
  • TREM1
  • TREML2
  • VCAM1
Canis familiaris (dog)
CD22 mediated BCR regulation
  • CD79A
  • CD79B
  • IGHM
  • LYN
  • MAG
  • PTPN6
Canis familiaris (dog)
Antigen activates B Cell Receptor (BCR) leading to generation of second messengers
  • BLNK
  • BTK
  • CD19
  • CD79A
  • CD79B
  • DAPP1
  • GRB2
  • IGHM
  • ITPR1
  • ITPR2
  • ITPR3
  • MAG
  • NCK1
  • PIK3AP1
  • PIK3CD
  • PIK3R1
  • PLCG2
  • PTPN6
  • SH3KBP1
  • SOS1
  • STIM1
  • SYK
  • TRPC1
  • VAV1
Canis familiaris (dog)
Costimulation by the CD28 family
  • AILIM
  • BTLA
  • GRB2
  • ICOS
  • ICOSLG
  • LOC100856339
  • PIK3CA
  • PIK3R1
  • PIK3R2
  • PTPN11
  • PTPN6
  • TNFRSF14
Canis familiaris (dog)
N-glycan trimming in the ER and Calnexin/Calreticulin cycle
  • AMFR
  • DERL1
  • ENGASE
  • NGLY1
  • PSMC1
  • RAD23B
  • RPS27A
  • UBA52
  • UBB
  • UBC
  • UBCEP2
  • UBXN1
  • VCP
Canis familiaris (dog)
Asparagine N-linked glycosylation
  • ASGR1
  • ASGR2
  • B4GALNT2
  • UMOD
Canis familiaris (dog)
The activation of arylsulfatases
  • ARSA
  • ARSB
  • ARSF
  • ARSG
  • ARSH
  • ARSI
  • ARSJ
  • ARSK
  • ARSL
  • STS
  • SUMF1
  • SUMF2
  • arsb
Canis familiaris (dog)
Synthesis of 5-eicosatetraenoic acids
  • ALOX5
  • ALOX5AP
  • LTC4S
  • PON1
  • PON2
  • PON3
Canis familiaris (dog)
Synthesis of Leukotrienes (LT) and Eoxins (EX)
  • ABCC1
  • ALOX15
  • ALOX5
  • ALOX5AP
  • CYP4A11
  • CYP4A37
  • CYP4A39
  • CYP4B1
  • CYP4F22
  • DPEP1
  • DPEP2
  • DPEP3
  • GGT1
  • LOC119863926
  • LTA4H
  • LTC4S
  • MRP1
Canis familiaris (dog)

About Release Notes Help Feedback

Click here to visit the beta site.


International Collaboration

GlyCosmos is a member of the GlySpace Alliance together with GlyGen and Glycomics@ExPASy.

Acknowledgements

Supported by JST NBDC Grant Number JPMJND2204

Partly supported by NIH Common Fund Grant #1U01GM125267-01


Logo License Policies Site Map

Contact: support@glycosmos.org

This work is licensed under Creative Commons Attribution 4.0 International


GlyCosmos Portal v4.0.0

Last updated: August 19, 2024