GlyCosmos Pathways

Integrated of pathway data, containing glycoproteins and glycans obtained from Reactome and the Metabolism of carbohydrates in Escherichia coli O-antigens obtained from ECODAB. Search by pathway name, species, and protein name.

Source Last Updated
Reactome March 20, 2024
ECODAB April 1, 2019
Displaying entries 126 - 150 of 268 in total
Pathway Name Protein Name UniProt ID ▲ Gene Symbol Organism GlyTouCan ID
Adherens junctions interactions
  • AFDN
  • CADM1
  • CADM2
  • CADM3
  • CDH1
  • CDH10
  • CDH11
  • CDH12
  • CDH13
  • CDH15
  • CDH17
  • CDH18
  • CDH2
  • CDH24
  • CDH3
  • CDH4
  • CDH5
  • CDH6
  • CDH7
  • CDH8
  • CDH9
  • CTNNA1
  • CTNNB1
  • CTNND1
  • JUP
  • NECTIN1
  • NECTIN2
  • NECTIN3
  • NECTIN4
Canis familiaris (dog)
Synaptic adhesion-like molecules
  • DLG1
  • DLG3
  • DLG4
  • FLOT1
  • FLOT2
  • GRIA1
  • GRIA3
  • GRIA4
  • GRIN1
  • GRIN2A
  • GRIN2B
  • GRIN2C
  • GRIN2D
  • LRFN1
  • LRFN2
  • LRFN3
  • LRFN4
  • NMDAR1
  • PTPRD
  • PTPRF
  • RTN3
Canis familiaris (dog)
Unblocking of NMDA receptors, glutamate binding and activation
  • ACTN2
  • CALM2
  • CAMK2A
  • CAMK2B
  • CAMK2G
  • DLG1
  • DLG2
  • DLG3
  • DLG4
  • GRIA1
  • GRIA2
  • GRIA3
  • GRIA4
  • GRIN1
  • GRIN2A
  • GRIN2B
  • GRIN2C
  • GRIN2D
  • LRRC7
  • NEFL
  • NMDAR1
Canis familiaris (dog)
Rhesus glycoproteins mediate ammonium transport.
  • RHAG
  • RHBG
  • RHCG
Canis familiaris (dog)
Gluconeogenesis
  • ALDOA
  • ALDOB
  • ALDOC
  • ENO2
  • ENO3
  • ENO4
  • FBP1
  • FBP2
  • G6PC1
  • G6PC2
  • G6PC3
  • GAPDH
  • GAPDHS
  • GPI
  • LOC106558132
  • PC
  • PCK1
  • PCK2
  • PGAM1
  • PGAM2
  • PGK1
  • PGK2
  • SLC37A1
  • SLC37A2
  • SLC37A4
  • TPI1
Canis familiaris (dog)
Biosynthesis of the N-glycan precursor (dolichol lipid-linked oligosaccharide, LLO) and transfer to a nascent protein
  • ALG1
  • ALG12
  • ALG14
  • ALG2
  • ALG3
  • ALG6
  • ALG8
  • ALG9
  • DPAGT1
  • MPDU1
Canis familiaris (dog)
Reactions specific to the complex N-glycan synthesis pathway
  • CHST10
  • FUCA1
  • FUT5
  • FUT8
  • MAN2A1
  • MAN2A2
  • MGAT2
Canis familiaris (dog)
Hyaluronan uptake and degradation
  • CD44
  • CHP1
  • GUSB
  • HEXA
  • HEXB
  • HMMR
  • HYAL1
  • LYVE1
  • SLC9A1
  • STAB2
Canis familiaris (dog)
IL-6-type cytokine receptor ligand interactions
  • CLCF1
  • CNTFR
  • CRLF1
  • CTF1
  • IL-31
  • IL11
  • IL11RA
  • IL31
  • IL31RA
  • IL6ST
  • JAK1
  • JAK2
  • LIF
  • LIFR
  • OSM
  • OSMR
  • TYK2
Canis familiaris (dog)
The retinoid cycle in cones (daylight vision)
  • AWAT2
  • DHRS3
  • OPN1LW
  • OPN1SW
  • RBP3
  • RCP
  • RLBP1
Canis familiaris (dog)
Response to elevated platelet cytosolic Ca2+
  • PRKCA
  • PRKCB
  • PRKCG
Canis familiaris (dog)
Antigen activates B Cell Receptor (BCR) leading to generation of second messengers
  • BLNK
  • BTK
  • CD19
  • CD79A
  • CD79B
  • DAPP1
  • GRB2
  • IGHM
  • ITPR1
  • ITPR2
  • ITPR3
  • MAG
  • NCK1
  • PIK3AP1
  • PIK3CD
  • PIK3R1
  • PLCG2
  • PTPN6
  • SH3KBP1
  • SOS1
  • STIM1
  • SYK
  • TRPC1
  • VAV1
Canis familiaris (dog)
CD22 mediated BCR regulation
  • CD79A
  • CD79B
  • IGHM
  • LYN
  • MAG
  • PTPN6
Canis familiaris (dog)
Cellular hexose transport
  • FGF21
  • FGF8C
  • MFSD4B
  • SLC2A1
  • SLC2A10
  • SLC2A11
  • SLC2A12
  • SLC2A2
  • SLC2A3
  • SLC2A4
  • SLC2A6
  • SLC2A8
  • SLC2A9
  • SLC45A3
  • SLC50A1
  • SLC5A1
  • SLC5A10
  • SLC5A2
  • SLC5A4
  • SLC5A9
Canis familiaris (dog)
Regulation of Glucokinase by Glucokinase Regulatory Protein
  • AAAS
  • GCK
  • GCKR
  • NDC1
  • NUP107
  • NUP133
  • NUP153
  • NUP155
  • NUP160
  • NUP188
  • NUP205
  • NUP210
  • NUP214
  • NUP35
  • NUP37
  • NUP42
  • NUP43
  • NUP50
  • NUP54
  • NUP58
  • NUP62
  • NUP85
  • NUP88
  • NUP93
  • NUP98
  • POM121C
  • RANBP2
  • SEC13
  • TPR
Canis familiaris (dog)
The canonical retinoid cycle in rods (twilight vision)
  • ABCA4
  • CYP4V2
  • DHRS9
  • HSD17B6
  • LRAT
  • MYO7A
  • RBP1
  • RBP3
  • RBP4
  • RDH10
  • RDH12
  • RDH16
  • RDH5
  • RHO
  • RLBP1
  • RPE65
  • SDR9C7
  • STRA6
  • TTR
Canis familiaris (dog)
Glycolysis
  • ADPGK
  • ALDOA
  • ALDOB
  • ALDOC
  • BPGM
  • ENO2
  • ENO3
  • ENO4
  • GAPDH
  • GAPDHS
  • GCK
  • GNPDA1
  • GNPDA2
  • GPI
  • HK1
  • HK2
  • HK3
  • HKDC1
  • LOC106558132
  • PFKL
  • PFKM
  • PFKP
  • PGAM1
  • PGAM2
  • PGK1
  • PGK2
  • PGM2L1
  • PKLR
  • TPI1
Canis familiaris (dog)
Reduction of cytosolic Ca++ levels
  • ATP2A1
  • ATP2A2
  • ATP2A3
  • ATP2B1
  • ATP2B2
  • ATP2B3
  • ATP2B4
  • CALM2
  • NCX1
  • SLC8A1
  • SLC8A2
  • SLC8A3
  • SRI
Canis familiaris (dog)
Elevation of cytosolic Ca2+ levels
  • ITPR1
  • ITPR2
  • ITPR3
  • P2RX1
  • P2RX2
  • P2RX3
  • P2RX4
  • P2RX5
  • P2RX6
  • P2RX7
  • TRPC3
  • TRPC6
  • TRPC7
Canis familiaris (dog)
Phase 2 - plateau phase
  • CACNA1C
  • CACNA2D2
  • CACNB1
  • CACNB2
  • CACNG4
  • CACNG6
  • CACNG7
  • CACNG8
Canis familiaris (dog)
Phase 0 - rapid depolarisation
  • CACNA1C
  • CACNA2D2
  • CACNB1
  • CACNB2
  • CACNG4
  • CACNG6
  • CACNG7
  • CACNG8
Canis familiaris (dog)
Dermatan sulfate biosynthesis
  • BCAN
  • BGN
  • CSPG4
  • CSPG5
  • DCN
  • DCN1C
  • DSE
  • DSEL
  • NCAN
  • UST
  • VCAN
Canis familiaris (dog)
Sialic acid metabolism
  • CMAS
  • CTSA
  • GLB1
  • GNE
  • NANP
  • NANS
  • NEU1
  • NEU2
  • NEU3
  • NEU4
  • NPL
  • SLC17A5
  • SLC35A1
  • ST3GAL1
  • ST3GAL2
  • ST3GAL3
  • ST3GAL4
  • ST3GAL5
  • ST3GAL6
  • ST6GAL1
  • ST6GAL2
  • ST6GALNAC1
  • ST6GALNAC2
  • ST6GALNAC3
  • ST6GALNAC4
  • ST6GALNAC5
  • ST6GALNAC6
  • ST8SIA1
  • ST8SIA2
  • ST8SIA3
  • ST8SIA4
  • ST8SIA5
  • ST8SIA6
Canis familiaris (dog)
N-Glycan antennae elongation
  • B4GALT1
  • B4GALT2
  • B4GALT3
  • B4GALT4
  • B4GALT5
  • B4GALT6
  • COA5
  • MGAT4B
  • MGAT4C
  • MGAT5
  • ST3GAL4
  • ST6GAL1
  • ST8SIA2
  • ST8SIA3
  • ST8SIA6
Canis familiaris (dog)
Synthesis of Leukotrienes (LT) and Eoxins (EX)
  • ABCC1
  • ALOX15
  • ALOX5
  • ALOX5AP
  • CYP4A11
  • CYP4A37
  • CYP4A39
  • CYP4B1
  • CYP4F22
  • DPEP1
  • DPEP2
  • DPEP3
  • GGT1
  • LOC119863926
  • LTA4H
  • LTC4S
  • MRP1
Canis familiaris (dog)

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GlyCosmos is a member of the GlySpace Alliance together with GlyGen and Glycomics@ExPASy.

Acknowledgements

Supported by JST NBDC Grant Number JPMJND2204

Partly supported by NIH Common Fund Grant #1U01GM125267-01


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Last updated: August 19, 2024