GlyCosmos Pathways

Integrated of pathway data, containing glycoproteins and glycans obtained from Reactome and the Metabolism of carbohydrates in Escherichia coli O-antigens obtained from ECODAB. Search by pathway name, species, and protein name.

Source Last Updated
Reactome March 20, 2024
ECODAB April 1, 2019
Displaying entries 151 - 175 of 268 in total
Pathway Name Protein Name UniProt ID Gene Symbol ▲ Organism GlyTouCan ID
Role of phospholipids in phagocytosis
  • CD247
  • CD3G
  • FCGR1A
  • FCGR2B
  • FCGR3A
  • LOC478984
  • PIK3CA
  • PIK3CB
  • PIK3R1
  • PIK3R2
  • PLA2G6
  • PLCG1
  • PLCG2
  • PLD1
  • PLD2
  • PLD3
  • PLD4
  • PLPP4
  • PLPP5
  • PRKCD
  • PRKCE
  • SYK
Canis familiaris (dog)
TNFs bind their physiological receptors
  • CD27
  • CD70
  • EDA
  • EDAR
  • EDARADD
  • LTA
  • MIIP
  • TNFB
  • TNFRSF11B
  • TNFRSF13B
  • TNFRSF14
  • TNFRSF17
  • TNFRSF18
  • TNFRSF1A
  • TNFRSF1B
  • TNFRSF4
  • TNFRSF6B
  • TNFRSF9
  • TNFSF1
  • TNFSF11
  • TNFSF13
  • TNFSF13B
  • TNFSF14
  • TNFSF18
  • TNFSF4
  • TNFSF8
  • TNLG1D
  • TNLG2A
  • TNLG2B
  • TNLG3A
  • TNLG7A
Canis familiaris (dog)
Hyaluronan uptake and degradation
  • CD44
  • CHP1
  • GUSB
  • HEXA
  • HEXB
  • HMMR
  • HYAL1
  • LYVE1
  • SLC9A1
  • STAB2
Canis familiaris (dog)
CD22 mediated BCR regulation
  • CD79A
  • CD79B
  • IGHM
  • LYN
  • MAG
  • PTPN6
Canis familiaris (dog)
GPVI-mediated activation cascade
  • CDC42
  • CLEC1B
  • FCER1G
  • FYN
  • GP40
  • GP6
  • LAT
  • LCK
  • LCP2
  • LOC100856339
  • LYN
  • MPIG6B
  • PDPK1
  • PDPN
  • PIK3CA
  • PIK3CB
  • PIK3CG
  • PIK3R1
  • PIK3R2
  • PIK3R5
  • PIK3R6
  • PLCG2
  • PTPN11
  • PTPN6
  • RAC1
  • RAC2
  • RHOA
  • RHOB
  • RHOG
  • SYK
  • VAV1
  • VAV2
  • VAV3
Canis familiaris (dog)
Voltage gated Potassium channels
  • CERG
  • ERG
  • KCNA1
  • KCNA10
  • KCNA2
  • KCNA3
  • KCNA4
  • KCNA5
  • KCNA6
  • KCNA7
  • KCNAB1
  • KCNAB2
  • KCNAB3
  • KCNB1
  • KCNB2
  • KCNC1
  • KCNC2
  • KCNC3
  • KCNC4
  • KCND1
  • KCND2
  • KCND3
  • KCNF1
  • KCNG1
  • KCNG3
  • KCNG4
  • KCNH1
  • KCNH2
  • KCNH3
  • KCNH4
  • KCNH5
  • KCNH6
  • KCNH7
  • KCNH8
  • KCNQ4
  • KCNQ5
  • KCNS1
  • KCNS2
  • KCNS3
  • KCNV1
  • KCNV2
Canis familiaris (dog)
Phase 3 - rapid repolarisation
  • CERG
  • ERG
  • KCNA5
  • KCNE2
  • KCNE3
  • KCNE4
  • KCNE5
  • KCNH2
Canis familiaris (dog)
Thyroxine biosynthesis
  • CGA
  • DUOX1
  • DUOX2
  • GPA1
  • IYD
  • SLC5A5
  • THOX1
  • TPO
  • TSHB
Canis familiaris (dog)
Hormone ligand-binding receptors
  • CGA
  • FSHB
  • FSHR
  • GNRH1
  • GNRHR
  • GPA1
  • GPB5
  • GPHA2
  • GPHB5
  • TSHB
  • TSHR
Canis familiaris (dog)
Signaling by SCF-KIT
  • CHEK1
  • CMA1
  • FER
  • FES
  • FYN
  • GAB2
  • GRAP
  • GRAP2
  • GRB10
  • GRB2
  • GRB7
  • HRAS
  • JAK2
  • KIT
  • KITLG
  • KRAS
  • LCK
  • LOC100856339
  • LYN
  • MGF
  • MMP9
  • NRAS
  • PIK3CA
  • PIK3R1
  • PIK3R2
  • PRKCA
  • PTPN11
  • PTPRU
  • RAC1
  • SOS1
  • SRC
  • STAT1
  • STAT3
  • STAT5A
  • STAT5B
  • TEC
  • VAV1
  • YES1
Canis familiaris (dog)
Digestion of dietary carbohydrate
  • CHIA
  • LCT
  • LOC119879923
  • LOC119881526
  • MGAM
  • SI
Canis familiaris (dog)
Reactions specific to the complex N-glycan synthesis pathway
  • CHST10
  • FUCA1
  • FUT5
  • FUT8
  • MAN2A1
  • MAN2A2
  • MGAT2
Canis familiaris (dog)
Interleukin-1 signaling
  • CHUK
  • CUL1
  • IKBKB
  • IKBKG
  • IL1A
  • IL1B
  • IL1R1
  • IL1R2
  • IL1RAP
  • IL1RN
  • IRAK1
  • IRAK2
  • IRAK3
  • IRAK4
  • LOC100686569
  • LOC100687259
  • LOC119881719
  • LOC610717
  • MAP2K6
  • MAP3K3
  • MAP3K7
  • MYD88
  • NFKB1
  • NFKBIA
  • PELI1
  • PELI2
  • PELI3
  • PSMA1
  • PSMA2
  • PSMA3
  • PSMA4
  • PSMA5
  • PSMA7
  • PSMA8
  • PSMB1
  • PSMB10
  • PSMB2
  • PSMB3
  • PSMB5
  • PSMB6
  • PSMB7
  • PSMB8
  • PSMB9
  • PSMC1
  • PSMC2
  • PSMC3
  • PSMC4
  • PSMC5
  • PSMD1
  • PSMD10
  • PSMD11
  • PSMD12
  • PSMD13
  • PSMD14
  • PSMD2
  • PSMD3
  • PSMD4
  • PSMD6
  • PSMD7
  • PSMD8
  • PSMD9
  • PSME1
  • PSME2
  • PSME4
  • PSMF1
  • RBX1
  • RELA
  • RPS27A
  • SKP1
  • SQSTM1
  • TAB1
  • TAB2
  • TAB3
  • TOLLIP
  • TRAF6
  • UBA52
  • UBB
  • UBC
  • UBCEP2
  • UBE2N
Canis familiaris (dog)
Signaling by Type 1 Insulin-like Growth Factor 1 Receptor (IGF1R)
  • CILP
  • IGF1
  • IGF1R
  • IGF2
  • IGFIA
Canis familiaris (dog)
Creatine metabolism
  • CKB
  • CKM
  • CKMT2
  • GAMT
  • GATM
  • LOC478277
  • SLC6A11
  • SLC6A12
  • SLC6A7
  • SLC6A8
Canis familiaris (dog)
IL-6-type cytokine receptor ligand interactions
  • CLCF1
  • CNTFR
  • CRLF1
  • CTF1
  • IL-31
  • IL11
  • IL11RA
  • IL31
  • IL31RA
  • IL6ST
  • JAK1
  • JAK2
  • LIF
  • LIFR
  • OSM
  • OSMR
  • TYK2
Canis familiaris (dog)
Activation of Matrix Metalloproteinases
  • CMA1
  • COL18A1
  • CTRB
  • CTRB1
  • CTSG
  • CTSL
  • CTSL1
  • ELA2
  • ELANE
  • FURIN
  • KLK1
  • KLK2
  • KLKB1
  • MMP1
  • MMP11
  • MMP13
  • MMP14
  • MMP15
  • MMP16
  • MMP17
  • MMP2
  • MMP24
  • MMP25
  • MMP3
  • MMP7
  • MMP8
  • MMP9
  • PLG
  • PRSS2
  • SPOCK3
  • TIMP1
  • TIMP2
Canis familiaris (dog)
Sialic acid metabolism
  • CMAS
  • CTSA
  • GLB1
  • GNE
  • NANP
  • NANS
  • NEU1
  • NEU2
  • NEU3
  • NEU4
  • NPL
  • SLC17A5
  • SLC35A1
  • ST3GAL1
  • ST3GAL2
  • ST3GAL3
  • ST3GAL4
  • ST3GAL5
  • ST3GAL6
  • ST6GAL1
  • ST6GAL2
  • ST6GALNAC1
  • ST6GALNAC2
  • ST6GALNAC3
  • ST6GALNAC4
  • ST6GALNAC5
  • ST6GALNAC6
  • ST8SIA1
  • ST8SIA2
  • ST8SIA3
  • ST8SIA4
  • ST8SIA5
  • ST8SIA6
Canis familiaris (dog)
Activation of the phototransduction cascade
  • CNGA1
  • CNGB1
  • GNAT1
  • GNB1
  • GNGT1
  • PDBS
  • PDE6A
  • PDE6B
  • PDE6G
  • PDEA
  • PDEB
  • PDEG
  • RHO
Canis familiaris (dog)
Trafficking and processing of endosomal TLR
  • CNPY3
  • CTSB
  • CTSL
  • CTSL1
  • CTSS
  • GRP94
  • HSP90B1
  • HSPC4
  • LGMN
  • TLR3
  • TLR7
  • TLR8
  • TLR9
  • TRA1
  • UNC93B1
Canis familiaris (dog)
Collagen degradation
  • COL12A1
  • COL13A1
  • COL15A1
  • COL18A1
  • COL19A1
  • COL25A1
  • COL26A1
  • CTSB
  • CTSD
  • FURIN
  • MMP1
  • MMP12
  • MMP13
  • MMP14
  • MMP15
  • MMP2
  • MMP20
  • MMP3
  • MMP7
  • MMP8
  • MMP9
  • PHYKPL
  • PRSS2
  • TMPRSS6
Canis familiaris (dog)
Signaling by PDGF
  • COL4A1
  • COL4A2
  • COL4A3
  • COL4A4
  • COL4A5
  • COL9A1
  • COL9A2
  • COL9A3
  • FURIN
  • PDGFA
  • PDGFB
  • PDGFC
  • PDGFD
  • PDGFRA
  • PDGFRB
  • PLAT
  • PLG
  • PTPN12
  • SPP1
  • THBS1
  • THBS2
  • THBS3
  • THBS4
Canis familiaris (dog)
Lectin pathway of complement activation
  • COLEC10
  • FCN2
  • MASP1
  • MASP2
Canis familiaris (dog)
COX reactions
  • COX1
  • PTGS1
Canis familiaris (dog)
Metal ion SLC transporters
  • CP
  • HEPH
  • SLC11A1
  • SLC11A2
  • SLC30A10
  • SLC31A1
  • SLC40A1
  • SLC41A1
  • SLC41A2
Canis familiaris (dog)

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GlyCosmos is a member of the GlySpace Alliance together with GlyGen and Glycomics@ExPASy.

Acknowledgements

Supported by JST NBDC Grant Number JPMJND2204

Partly supported by NIH Common Fund Grant #1U01GM125267-01


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Last updated: August 19, 2024