GlyCosmos Portal

GlyCosmos Pathways

Integrated of pathway data, containing glycoproteins and glycans obtained from Reactome and the Metabolism of carbohydrates in Escherichia coli O-antigens obtained from ECODAB. Search by pathway name, species, and protein name.

Source	Last Updated
Reactome	March 20, 2024
ECODAB	April 1, 2019

Displaying entries **176 - 200** of **252** in total

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Pathway Name	Protein Name	UniProt ID	Gene Symbol	Organism ▼
EPH-Ephrin signaling	Ephrin B3 Ephrin type-A receptor 3 Ephrin type-A receptor 4a (Fragment) Ephrin type-B receptor 4a Ephrin-A1 Ephrin-A2 Ephrin-A3 Ephrin-A5b Ephrin-B1 Ephrin-B2b receptor protein-tyrosine kinase receptor protein-tyrosine kinase receptor protein-tyrosine kinase	O13146 O13148 O73875 O93431 P79727 P79728 Q5VSJ4 Q6NZS1 Q90YC5 Q90Z31 Q90Z32 Q90Z33 Q90ZN9	D160 EphA3 RTK2 al1 efna1 efna1b efna2 efna3 efna3b efna5 efna5b efnb1 efnb2b efnb3 efnb3b ek1 ek2 epha2 epha2a epha3 epha4 epha4a epha4b epha7 ephb4a ephrin-A3 eplg6 eplg7 fc10d03 fc51g03 hm:zeh0344 id:ibd2782 id:ibd5049 id:ibd5152 lerk6 lerk7 rtk2 rtk5 rtk6 si:dkey-23k6.1 wu:fc10d03 wu:fc51g03 zeh0344 zek1 zek2 zgc:100772 zgc:111938	Danio rerio (zebrafish)
Synaptic adhesion-like molecules	AMPA receptor subunit GluR1A Discs large homolog 1-like protein Disks large homolog 4 Flotillin-2a Flotillin Glutamate receptor Glutamate receptor Leucine-rich repeat and fibronectin type III domain-containing 2b Leucine-rich repeat and fibronectin type III domain-containing protein 1 Leucine-rich repeat and fibronectin type-III domain-containing protein 3	E7FB24 E7FE43 Q5PYH5 Q6PGX3 Q6R005 Q71E59 Q71E60 Q71E65 Q7ZZ76 Q98TZ8	AMPA GRIN3A SI:zC231H1.1 ZfGluR1a dlg1l dlg4 flot1 flot1a flot2a glur1a glur3b glur4a gria1.1 gria1a gria3 gria3.2 gria3b gria4 gria4a iGluR4 lrfn1 lrfn2b reggie2 si:bz1o18.1 si:cabz01090165.1 si:dz44o19.1 si:zc140k5.3 wu:fj45g11 zfGRIA1[a] zfGRIA3[b] zmp:0000001073	Danio rerio (zebrafish)
The NLRP3 inflammasome	Apoptosis-associated speck-like protein containing a CARD Heat shock protein HSP 90-beta NACHT, LRR and PYD domains-containing protein 1 homolog P2X purinoceptor Pannexin-1 Proline-serine-threonine phosphatase-interacting protein 1 Protein SGT1 homolog Thioredoxin-interacting protein Thioredoxin Thioredoxin Uncharacterized protein LOC568410	A0A386CAB9 B3DJF9 O57521 Q2YDR2 Q5U3E4 Q6DGI6 Q7SZM2 Q7ZUI4 Q7ZUN0 Q7ZWB6 Q9I9N6	TXN asc asc1 fb15h09 hsp90ab1 hsp90b hspc3 nlrp1 p2rx7 p2xr7 panx1 panx1a pstpip1b pycard sb:cb368 sgut1 sugt1 txn txnip txnipa wu:fb15h09 wu:fd45a02 zgc:123255 zgc:194990 zgc:55631 zgc:92903	Danio rerio (zebrafish)
Clearance of dopamine	Transporter	Q90ZV1	dat slc6a3	Danio rerio (zebrafish)
Multifunctional anion exchangers	Chloride anion exchanger Sodium-coupled monocarboxylate transporter 2 Sodium-independent sulfate anion transporter Solute carrier family 26 member 6, like Sulfate transporter	A9JTH4 B6DUH7 E7F9I7 Q7T2A2 Q7T384	SLC26A6 si:dkey-31f5.2 slc26a11 slc26a2 slc26a3 slc26a3.1 slc26a6l slc5a12 smctn wu:fd14d06 zgc:64158	Danio rerio (zebrafish)
Nicotinamide salvaging	ATP-dependent (S)-NAD(P)H-hydrate dehydratase Cytochrome P450, family 8, subfamily B, polypeptide 1 NAD(P)H-hydrate epimerase NAD-capped RNA hydrolase NUDT12 Nicotinamide N-methyltransferase Nicotinate phosphoribosyltransferase Poly [ADP-ribose] polymerase Poly [ADP-ribose] polymerase Poly [ADP-ribose] polymerase Prostacyclin synthase Prostaglandin G/H synthase 2 Renalase Sodium-coupled monocarboxylate transporter 1	F1Q575 F1QUL7 F1R1Q8 F1RE08 Q08CN1 Q3ZMH1 Q567I5 Q5RI06 Q6AZW0 Q6DHI7 Q6DHK1 Q6NX05 Q6P3H4	aibp apoa1bp cyp8b1.1 naprt naprt1 naxd naxe nudt12 parp16 parp6b parp8 ptgis ptgisl ptgs2b rnls si:ch73-198j8.4 si:dkey-3h3.2 si:dkey-97o5.6 slc5a8 slc5a8l smcte zgc:64002 zgc:77744 zgc:92286 zgc:92406	Danio rerio (zebrafish)
Calcitonin-like ligand receptors	Adm2 protein Calcitonin gene-related peptide 2 isoform X1 Calcitonin gene-related peptide type 1 receptor Ramp2 protein Receptor activity-modifying protein 1	A9JR59 B3DJI5 F1QIK6 Q68EK2 Q6DGA3	adm2 adm2a calc calca calcrl calcrla cgrp imdn ramp1 ramp2 si:dkey-22l11.3 zgc:174936 zgc:92886	Danio rerio (zebrafish)
Activation of the phototransduction cascade	Guanine nucleotide-binding protein (G protein), alpha transducing activity polypeptide 1 Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1 Guanine nucleotide-binding protein subunit gamma Rhodopsin	P35359 Q6PBN9 Q803H5 Q90WX6	GNB1x fb39f01 fk56e06 gnat1 gnb1b gnb1l gng1 gngt1 rho wu:fb39f01 wu:fb98e06 wu:fj09d12 wu:fk53d06 wu:fk56e06 zfo2 zgc:55774 zgc:73318	Danio rerio (zebrafish)
Immunoregulatory interactions between a Lymphoid and a non-Lymphoid cell	CD154 CD226 antigen precursor CD40 molecule, TNF receptor superfamily member 5 Coxsackievirus and adenovirus receptor homolog Death ligand 3 Integrin alpha 4 Integrin beta Integrin beta Integrin beta Intercellular adhesion molecule 5 precursor Myelin-associated glycoprotein Nectin 1b Sodium channel subunit beta-2 TNF superfamily member 10 Uncharacterized protein LOC570749 precursor	A0A0R4ICS1 A1L2D6 A4JYJ6 A4JYJ9 B0JYH6 B3DIV2 B8X730 B8YI05 F1QSA4 Q06W28 Q0PKX8 Q19U09 Q3YAA0 Q6DHG9 Q90Y50	SCN2B cb810 cd226 cd40 cd40lg cxadr dl3 itga4 itgb1 itgb1b itgb1b.1 itgb1b.2 mag nectin1b pvrl1b sb:cb1043 sc:d147 scn2b si:ch211-231h20.3 si:ch211-264f5.2 si:ch73-208g10.1 siglec-4 tnfsf10 tnfsf10l2 tnfsf10l4 zgc:113297 zgc:158817 zgc:85632 zgc:92320	Danio rerio (zebrafish)
Cation-coupled Chloride cotransporters	Solute carrier family 12 member 2	A0A0G2KTI4	nkcc1 slc12a2	Danio rerio (zebrafish)
Adrenaline,noradrenaline inhibits insulin secretion	Alpha-2A adrenergic receptor Alpha-2C adrenergic receptor Guanine nucleotide binding protein (G protein), beta polypeptide 3, like Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1 Guanine nucleotide-binding protein G(i) subunit alpha-1 Guanine nucleotide-binding protein G(i) subunit alpha-2 Guanine nucleotide-binding protein subunit beta-5a Guanine nucleotide-binding protein subunit gamma Guanine nucleotide-binding protein subunit gamma Guanine nucleotide-binding protein subunit gamma Guanine nucleotide-binding protein subunit gamma Guanine nucleotide-binding protein subunit gamma Guanine nucleotide-binding protein subunit gamma Guanine nucleotide-binding protein subunit gamma Guanine nucleotide-binding protein subunit gamma adenylate cyclase	A0A0R4IHM6 A1L271 D2CFN3 Q503Q6 Q6DGZ5 Q6DH00 Q6DH55 Q6PBN9 Q6PBR4 Q6TH03 Q7T3D3 Q7ZWI5 Q803H5 Q90WY4 Q90WY6 Q90Z40	GNB1x GNG5 [g]3 adcy5 adra2a adra2c fb39f01 fi21e06 gnai1 gnai2 gnai2b gnb1b gnb1l gnb3a gnb3l gnb5a gng1 gng12b gng13b gng3 gng5 gng7 gng8 gngt1 gngt2 gngt2a id:ibd1139 ik:tdsubc_2c12 si:dkey-178j17.2 si:dkey-44g17.6 si:dkeyp-60a7.2 wu:fb39f01 wu:fb98e06 wu:fi21e06 wu:fj09d12 wu:fj56b02 wu:fk53d05 wu:fk53d06 xx:tdsubc_2c12 zgc:100880 zgc:110316 zgc:55774 zgc:56690 zgc:63957 zgc:73318 zgc:92641 zgc:92704 zgc:92709 zgc:92852	Danio rerio (zebrafish)
Enzymatic degradation of dopamine by COMT	Catechol O-methyltransferase A Transmembrane O-methyltransferase homolog	A0A193KX02 F4ZGF2	comta mrc tomt	Danio rerio (zebrafish)
Rhesus glycoproteins mediate ammonium transport.	Ammonium transporter Rh type A Ammonium transporter Rh type B Rh family, C glycoprotein, like 1	A8E4T4 Q7T067 Q7T070	rhag rhbg rhcg2a rhcgl1 wu:fj61d12 zgc:171954	Danio rerio (zebrafish)
p75NTR recruits signalling complexes	Myeloid differentiation primary response protein MyD88 Nerve growth factor receptor b Nerve growth factor Protein kinase C iota type Receptor-interacting serine/threonine-protein kinase 2 Sequestosome-1 TNF receptor-associated factor 6 Ubiquitin-ribosomal protein eL40 fusion protein Ubiquitin-ribosomal protein eS31 fusion protein	E2DGP8 F1Q5Z8 Q3B7P7 Q4V958 Q5XJ85 Q6IWL4 Q6YBR5 Q7SXA3 Q90XF2	RICK hal hm:zeh0386 ik:tdsubc_1f2 myd88 ngf ngfb ngfrb ngfrl p62 prkci ripk2 rps27a sb:cb621 sqstm1 tdsubc_1f2 traf6 uba52 wu:fa91f08 xx:tdsubc_1f2 zgc:123344 zgc:66168 zgc:85784	Danio rerio (zebrafish)
Transcriptional and post-translational regulation of MITF-M expression and activity	Adenosine 5'-monophosphoramidase HINT1 Kit ligand Mast/stem cell growth factor receptor kita Melanocyte-inducing transcription factor b Mitogen-activated protein kinase	F1Q885 Q56JH6 Q642J0 Q7ZW72 Q8JFR5	hint1 kit kita kitla kitlga mapk1 mitfb sparse zERK2	Danio rerio (zebrafish)
RHO GTPases Activate ROCKs	Rho-associated protein kinase Rho-related GTP-binding protein RhoA-C	Q7T2E8 Q90Y37	rhoac rock2 rock2a rok2	Danio rerio (zebrafish)
Class B/2 (Secretin family receptors)	Corticoliberin precursor Corticotropin-releasing factor-binding protein Parathyroid hormone 2 receptor a Parathyroid hormone-related peptide 1 Parathyroid hormone/parathyroid hormone-related peptide receptor Parathyroid hormone Tuberoinfundibular peptide of 39 residues	Q1L5E8 Q5U3N6 Q6DG79 Q6WQ25 Q8QGA2 Q9PVD3 Q9PWB7	PTH crf crh crhb crhbp pth1 pth1a pth1r pth1ra pth2 pth2r pth2ra pthlh pthlha pthr1 pthr2 pthrp si:ch211-286m4.5 tip39 zPTH1R zgc:101864 zgc:123155 zgc:91905	Danio rerio (zebrafish)
Axonal growth inhibition (RHOA activation)	Leucine rich repeat and Ig domain containing 4b isoform X1 Leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein 1-B Myelin-associated glycoprotein Nerve growth factor receptor b Reticulon Reticulon Rho GDP-dissociation inhibitor 1 Rho-related GTP-binding protein RhoA-C	A3KH16 E2DGP8 F1QSA4 Q4G5V0 Q4G5V7 Q66HV9 Q7T2E8 Q802W6	arhgdia fb64c01 im:7136397 lingo1 lingo1b lingo4b mag ngfrb ngfrl rhoac rtn1 rtn1a rtn4b rtn5 rtn6 siglec-4 wu:fa96g11 wu:fb64c01 wu:fc07e07 wu:fq24d12 zgc:113566 zgc:198379 zgc:55554 zgc:73298 zgc:77681 zgc:86778	Danio rerio (zebrafish)
Highly calcium permeable nicotinic acetylcholine receptors	Acetylcholine receptor subunit alpha Cholinergic receptor, nicotinic, beta polypeptide 3a Neuronal acetylcholine receptor subunit alpha-2 Neuronal acetylcholine receptor subunit alpha-4 Neuronal acetylcholine receptor subunit alpha-6 precursor	Q0PJT8 Q0PJT9 Q1RLX8 Q7ZZP6 Q98880	LOC555747 LOC556619 chrna1 chrna2 chrna2a chrna4 chrna4b chrna6 chrnb3a nic1 si:dkey-234d14.1 zgc:136717	Danio rerio (zebrafish)
Glutamate Neurotransmitter Release Cycle	Amino acid transporter Amino acid transporter Amino acid transporter Amino acid transporter Amino acid transporter PRA1 family protein Ras-related protein Rab-3 Sodium-coupled neutral amino acid symporter 2 Synaptotagmin Vesicle-associated membrane protein 2 Vesicular glutamate transporter 1 glutaminase	A3QK31 C5H4R2 D7RVR6 D7RVR8 D7RVS0 D7RVS5 E7F6N5 Q5RGB5 Q5SPB1 Q5TZ27 Q6DGQ9 Q7SZZ5	EAAT3 EAAT5A MGC163045 SLC1A2a SLC1A7 addicsin arl6ip5b fj55a04 glsl rab3a rab3ab si:ch211-255d18.4 si:ch211-284b7.1 si:ch73-116b16.2 si:dkey-21n12.2 slc17a7 slc17a7a slc1a1 slc1a2a slc1a3b slc1a7 slc1a7a slc1a7b slc38a2 snat2 syt1 syt1a vamp2 vglut1 wu:fj41c01 wu:fj55a04 wu:fj61c06 wu:fk56d05 zgc:112516 zgc:73302 zgc:91959 zgc:92811 zgc:92899 zp22	Danio rerio (zebrafish)
Class A/1 (Rhodopsin-like receptors)	Cannabinoid receptor 2 Cannabinoid receptor G protein-coupled receptor 35, tandem duplicate 1 G-protein coupled receptor 183-A G-protein coupled receptor 39 Hydroxycarboxylic acid receptor 1-4 Melatonin receptor type 1A-A Melatonin receptor type 1B-B Oxoglutarate (Alpha-ketoglutarate) receptor 1 Platelet-activating factor receptor	A5PLE7 A8KB61 E7EZR6 F1QUW3 P51046 P51049 Q1RLT8 Q20HN0 Q7T298 Q7T3Q3	CB1R cb1 cb2a cb2b cnr1 cnr2 gpr183 gpr183a gpr35.1 gpr39 hcar1-4 mel1ar mel1br mtnr1aa mtnr1ar mtnr1bb mtnr1br mtnr1br-2 oxgr1a.1 ptafr zgc:136854 zgc:64187	Danio rerio (zebrafish)
O-linked glycosylation	Beta-1,4-glucuronyltransferase 1 Dystroglycan 1 Protein O-linked-mannose beta-1,2-N-acetylglucosaminyltransferase Protein O-linked-mannose beta-1,4-N-acetylglucosaminyltransferase 2 Protein O-mannose kinase Protein O-mannosyl-transferase 1 Protein O-mannosyl-transferase 2 UDP-GalNAc Xylosyl- and glucuronyltransferase LARGE1 Xylosyl- and glucuronyltransferase LARGE2s	F1Q8R9 F1QF89 F1QMH7 F1QNB2 L7YAI7 Q502B3 Q5NDE5 Q5U3W1 Q66PG1 Q66PG2	ago61 b3galnt2 b3gnt1 b4gat1 dag dag1 gtdc2 gyltl1b im:7151461 large large1 large2 pomgnt1 pomgnt2 pomk pomt1 pomt2 sgk196 wu:fb83d06 wu:fi25f06 wu:fi37b08 zPOMGnT1 zgc:109786 zgc:158130	Danio rerio (zebrafish)
Acetylcholine Neurotransmitter Release Cycle	Choline O-acetyltransferase Probable vesicular acetylcholine transporter-A Ras-related protein Rab-3 Synaptotagmin Vesicle-associated membrane protein 2	B2ZGJ1 Q08C75 Q5RGB5 Q5TZ27 Q7SZZ5	chat rab3a rab3ab si:ch211-255d18.4 slc18a3a syt1 syt1a vamp2 wu:fj41c01 wu:fj61c06 wu:fk56d05 zgc:112516 zgc:73302 zgc:92899	Danio rerio (zebrafish)
Phospholipase C-mediated cascade: FGFR1	1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase gamma Fgf23 Fibroblast growth factor 17 Fibroblast growth factor 3 Fibroblast growth factor 8 Fibroblast growth factor receptor 1-A Fibroblast growth factor Fibroblast growth factor Fibroblast growth factor Fibroblast growth factor Fibroblast growth factor Fibroblast growth factor Fibroblast growth factor Klotho Putative fibroblast growth factor 1	B3DGE3 F1RC43 O57341 P48802 Q1XG76 Q38PL0 Q5MK87 Q5TLE1 Q5TLE2 Q6PBT8 Q6SJP8 Q804J6 Q8AY90 Q90Z00 Q9DFC9	dob fc89b01 fgf-1 fgf-10 fgf-3 fgf-8 fgf1 fgf10 fgf10a fgf17 fgf17b fgf2 fgf20a fgf22 fgf23 fgf3 fgf4 fgf5 fgf6b fgf8 fgf8a fgfr1 fgfr1a fj46f04 id:ibd5158 kl plcg1 si:dkey-21e2.2 si:dkeyp-74c5.3 wu:fb05c08 wu:fc89b01 wu:fd11d03 wu:fj46f04 wu:fj57a05 zgc:109774 zgc:194535	Danio rerio (zebrafish)
Signaling by Activin	Inhibin beta A chain Inhibin beta B chain Mothers against decapentaplegic homolog 2 Mothers against decapentaplegic homolog Serine/threonine-protein kinase receptor	A1L1T8 B0S7E0 Q8AY15 Q9I9P9 Q9YGU4	ActrIIB actbb actbetaB actr2b actrIIb acvr2b acvr2ba inhbab inhbal inhbb madh2 madh3 madh3a smad2 smad3 smad3a wu:fa99e03 wu:fj97d11 zgc:158348	Danio rerio (zebrafish)

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