GlyCosmos Pathways

Integrated of pathway data, containing glycoproteins and glycans obtained from Reactome and the Metabolism of carbohydrates in Escherichia coli O-antigens obtained from ECODAB. Search by pathway name, species, and protein name.

Source Last Updated
Reactome March 20, 2024
ECODAB April 1, 2019
Displaying entries 326 - 350 of 360 in total
Pathway Name Protein Name UniProt ID Gene Symbol Organism GlyTouCan ID ▲
Lysosomal oligosaccharide catabolism
  • MAN2B1
  • MAN2B2
  • MAN2C1
  • MANBA
Sus scrofa (pig)
HS-GAG degradation
  • AGRN
  • GLB1
  • GLB1L
  • GLB1L2
  • GLB1L3
  • GPC1
  • GPC2
  • GPC3
  • GPC4
  • GPC5
  • GPC6
  • GUSB
  • HPSE
  • HPSE2
  • IDS
  • IDUA
  • NAGLU
  • SDC1
  • SDC2
  • SDC3
  • SDC4
  • SGSH
Sus scrofa (pig)
N-glycan trimming in the ER and Calnexin/Calreticulin cycle
  • AMFR
  • ENGASE
  • NGLY1
  • PSMC1
  • RPS27A
  • UBA52
  • UBB
  • UBC
  • UBXN1
Sus scrofa (pig)
Keratan sulfate degradation
  • ACAN
  • FMOD
  • GLB1
  • GLB1L
  • GLB1L2
  • GLB1L3
  • GNS
  • HEXA
  • HEXB
  • KERA
  • LUM
  • OGN
  • OMD
  • PRELP
Sus scrofa (pig)
Glycosphingolipid catabolism
  • ARSA
  • ARSB
  • ARSD
  • ARSG
  • ARSI
  • ARSJ
  • ARSK
  • ARSL
  • ASAH1
  • ASAH2
  • CTSA
  • ENPP7
  • GALC
  • GBA2
  • GBA3
  • GLA
  • GLB1
  • GLB1L
  • GLB1L2
  • GLB1L3
  • GM2A
  • HEXA
  • HEXB
  • LOC100621771
  • M6PR
  • NEU1
  • NEU2
  • NEU3
  • NEU4
  • PSAP
  • SMPD1
  • SMPD2
  • SMPD3
  • SMPD4
  • STS
  • SUMF1
  • SUMF2
Sus scrofa (pig)
CS/DS degradation
  • ARSB
  • BCAN
  • BGN
  • CSPG4
  • CSPG5
  • DCN
  • HEXA
  • HEXB
  • HYAL1
  • IDS
  • IDUA
  • NCAN
  • VCAN
Sus scrofa (pig)
Pentose phosphate pathway
  • DERA
  • G6PD
  • PGD
  • PGLS
  • PGM2
  • RBKS
  • RPE
  • RPIA
  • SHPK
  • TALDO1
  • TKT
  • tkt
Sus scrofa (pig)
Hyaluronan biosynthesis and export
  • ABCC5
  • CEMIP
  • HAS1
  • HAS3
  • SHAS2
  • shas3
Sus scrofa (pig)
Hyaluronan uptake and degradation
  • CD44
  • GUSB
  • HEXA
  • HEXB
  • HMMR
  • HYAL1
  • HYAL2
  • LYVE1
  • SLC9A1
  • STAB2
Sus scrofa (pig)
Lewis blood group biosynthesis
  • B3GALT1
  • B3GALT2
  • B3GALT4
  • FUT10
  • FUT11
  • FUT2
  • FUT4
  • FUT7
  • LOC100513844
  • LOC110255214
  • ST3GAL-III
  • ST3GAL3
  • ST3GAL4
  • ST3GAL6
  • ST6GALNAC6
Sus scrofa (pig)
Ficolins bind to repetitive carbohydrate structures on the target cell surface
  • FCN1
  • FCN2
  • MASP1
  • MASP2
Sus scrofa (pig)
Initial triggering of complement
  • C1QA
  • C1QB
  • C1QC
  • C1R
  • C1S
  • C2
  • C4A
  • COLEC10
  • COLEC11
  • FCN1
  • FCN2
  • IGKV5-2
  • LOC100125542
  • LOC100523213
  • MASP1
  • MASP2
  • MBL2
Sus scrofa (pig)
Lectin pathway of complement activation
  • COLEC10
  • COLEC11
  • FCN1
  • FCN2
  • MASP1
  • MASP2
  • MBL2
Sus scrofa (pig)
Antimicrobial peptides
  • BPI
  • BPIFA1
  • BPIFA2
  • BPIFB1
  • BPIFB2
  • BPIFB4
  • CHGA
  • CLU
  • EPPIN
  • GNLY
  • LEAP2
  • LOC100154047
  • LOC100520832
  • LOC100624628
  • LOC102163838
  • LOC110255221
  • LOC110260309
  • LTF
  • PGLYRP1
  • PGLYRP2
  • PGLYRP3
  • PGLYRP4
  • PMAP-36
  • PRSS2
  • REG3G
  • try
Sus scrofa (pig)
Cellular hexose transport
  • FGF21
  • GLUT1
  • GLUT2
  • GLUT3
  • MFSD4B
  • SAAT1
  • SGLT3
  • SLC2A1
  • SLC2A10
  • SLC2A11
  • SLC2A12
  • SLC2A2
  • SLC2A3
  • SLC2A4
  • SLC2A6
  • SLC2A7
  • SLC2A8
  • SLC2A9
  • SLC45A3
  • SLC50A1
  • SLC5A1
  • SLC5A10
  • SLC5A2
  • SLC5A4
  • SLC5A9
Sus scrofa (pig)
Digestion of dietary carbohydrate
  • AMY2
  • CHIA
  • CHIT1
  • LCT
  • LOC100153446
  • LOC100521789
  • LOC100625897
  • MGAM
  • SI
Sus scrofa (pig)
Lactose synthesis
  • B4GALT1
  • GLUT1
  • LALBA
  • SLC2A1
Sus scrofa (pig)
Intestinal hexose absorption
  • GLUT2
  • SLC2A2
  • SLC2A5
  • SLC5A1
Sus scrofa (pig)
Glycolysis
  • ADPGK
  • ALDOA
  • ALDOB
  • ALDOC
  • BPGM
  • ENO2
  • ENO3
  • ENO4
  • GAPD
  • GAPDH
  • GAPDHS
  • GNPDA1
  • GPI
  • HK1
  • HK2
  • HK3
  • HKDC1
  • PFKL
  • PFKM
  • PFKP
  • PGAM1
  • PGAM2
  • PGK1
  • PGK2
  • PKLR
  • PKM
  • TPI1
Sus scrofa (pig)
Synthesis, secretion, and inactivation of Glucagon-like Peptide-1 (GLP-1)
  • CD26
  • DPP4
  • FFAR4
  • GCG
  • GNB1
  • GNB3
  • GPR119
  • GPR120
  • GRP
  • LEP
  • O3FAR1
  • OB
  • OBS
Sus scrofa (pig)
N-glycan trimming and elongation in the cis-Golgi
  • MANEA
  • MGAT1
Sus scrofa (pig)
Glycogen breakdown (glycogenolysis)
  • CALM3
  • GAA
  • GYG1
  • GYG2
  • PHKA1
  • PHKA2
  • PHKB
  • PHKG2
  • PYGL
  • PYGM
Sus scrofa (pig)
Sensory perception of sweet, bitter, and umami (glutamate) taste
  • GNB1
  • GNB3
  • ITPR3
  • LOC100154902
  • TAS1R1
  • TAS1R2
  • TAS1R3
  • TAS2R1
  • TAS2R10
  • TAS2R16
  • TAS2R3
  • TAS2R39
  • TAS2R4
  • TAS2R40
  • TAS2R41
  • TAS2R7
Sus scrofa (pig)
Regulation of insulin secretion
  • ABCC8
  • CACNA1D
  • CACNA1E
  • CACNA2D2
  • CACNB2
  • CACNB3
  • GLUT1
  • GLUT2
  • RAPGEF3
  • RAPGEF4
  • SLC2A1
  • SLC2A2
Sus scrofa (pig)
Fructose biosynthesis
  • AKR1B1
  • SORD
Sus scrofa (pig)

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Acknowledgements

Supported by JST NBDC Grant Number JPMJND2204

Partly supported by NIH Common Fund Grant #1U01GM125267-01


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Last updated: August 19, 2024