GlyCosmos Pathways

Integrated of pathway data, containing glycoproteins and glycans obtained from Reactome and the Metabolism of carbohydrates in Escherichia coli O-antigens obtained from ECODAB. Search by pathway name, species, and protein name.

Source Last Updated
Reactome March 20, 2024
ECODAB April 1, 2019
Displaying entries 326 - 350 of 360 in total
Pathway Name ▼ Protein Name UniProt ID Gene Symbol Organism GlyTouCan ID
CS/DS degradation
  • ARSB
  • BCAN
  • BGN
  • CSPG4
  • CSPG5
  • DCN
  • HEXA
  • HEXB
  • HYAL1
  • IDS
  • IDUA
  • NCAN
  • VCAN
Sus scrofa (pig)
COPII-mediated vesicle transport
  • ANKRD28
  • AREG
  • CD59
  • CNIH1
  • CNIH3
  • COL7A1
  • CTSZ
  • F5
  • FOLR1
  • FOLR3
  • GOLGA2
  • GORASP1
  • GOSR2
  • GRIA1
  • LMAN1
  • LMAN1L
  • LMAN2
  • LMAN2L
  • MCFD2
  • NAPA
  • NAPB
  • NAPG
  • NSF
  • PPP6C
  • PPP6R1
  • PPP6R3
  • PREB
  • SAR1B
  • SCFD1
  • SEC13
  • SEC16A
  • SEC16B
  • SEC22C
  • SEC23A
  • SEC23IP
  • SEC24A
  • SEC24B
  • SEC24C
  • SEC24D
  • SEC31A
  • SERPINA1
  • TFG
  • TGFA
  • TMED10
  • TMED2
  • TRAPPC10
  • TRAPPC2
  • TRAPPC2L
  • TRAPPC3
  • TRAPPC4
  • TRAPPC5
  • TRAPPC6A
  • TRAPPC9
  • UABP-2
  • USO1
  • YKT6
Sus scrofa (pig)
COPI-mediated anterograde transport
  • ACTR10
  • ACTR1A
  • ANK1
  • ARCN1
  • ARF1
  • ARF3
  • ARF4
  • ARF5
  • ARFGAP1
  • ARFGAP2
  • ARFGAP3
  • ARP11
  • B4GALT7
  • BET1L
  • CAPZA1
  • CAPZA2
  • CAPZB
  • CD55
  • CD59
  • COG1
  • COG2
  • COG3
  • COG4
  • COG5
  • COG6
  • COG7
  • COG8
  • COPA
  • COPB1
  • COPB2
  • COPE
  • COPG1
  • COPG2
  • COPZ1
  • COPZ2
  • DCTN1
  • DCTN2
  • DCTN3
  • DCTN4
  • DCTN5
  • DCTN6
  • DYNC1I1
  • DYNC1I2
  • DYNC1LI1
  • DYNC1LI2
  • DYNLL1
  • DYNLL2
  • FOLR1
  • FOLR3
  • GBF1
  • GOLGA2
  • GOLGB1
  • GORASP1
  • GOSR2
  • INS
  • KDELR1
  • KDELR2
  • LC8
  • NAPA
  • NAPB
  • NAPG
  • NSF
  • SPTA1
  • SPTAN1
  • SPTBN1
  • SPTBN2
  • SPTBN4
  • SPTBN5
  • TMED10
  • TMED2
  • TMED3
  • TMED7
  • TMED9
  • TMEM115
  • USO1
  • YKT6
Sus scrofa (pig)
CDC42 GTPase cycle
  • ABR
  • ARAP1
  • ARAP2
  • ARAP3
  • ARFGAP2
  • ARFGAP3
  • ARHGAP1
  • ARHGAP10
  • ARHGAP17
  • ARHGAP20
  • ARHGAP21
  • ARHGAP22
  • ARHGAP24
  • ARHGAP26
  • ARHGAP27
  • ARHGAP29
  • ARHGAP30
  • ARHGAP31
  • ARHGAP33
  • ARHGAP35
  • ARHGAP39
  • ARHGAP4
  • ARHGAP44
  • ARHGAP45
  • ARHGAP5
  • ARHGAP9
  • ARHGDIA
  • ARHGDIG
  • ARHGEF10
  • ARHGEF11
  • ARHGEF12
  • ARHGEF15
  • ARHGEF16
  • ARHGEF19
  • ARHGEF25
  • ARHGEF26
  • ARHGEF5
  • ARHGEF6
  • ARHGEF7
  • ARHGEF9
  • BAIAP2
  • BCR
  • CAV1
  • CDC42
  • CDC42BPA
  • CDC42BPB
  • CDC42EP1
  • CDC42EP2
  • CDC42EP3
  • CDC42EP4
  • CDC42EP5
  • CDC42SE2
  • CHN1
  • CPNE8
  • DAAM1
  • DEF6
  • DEPDC1B
  • DIAPH3
  • DLC1
  • DNMBP
  • DOCK10
  • DOCK11
  • DOCK6
  • DOCK7
  • DOCK8
  • DOCK9
  • ECT2
  • FAM13B
  • FARP1
  • FGD1
  • FGD2
  • FGD3
  • FGD4
  • FMNL1
  • FMNL2
  • FMNL3
  • FNBP1
  • FNBP1L
  • GIT1
  • GIT2
  • GMIP
  • GNA13
  • GOLGA2
  • IQGAP2
  • IQGAP3
  • ITSN1
  • JUP
  • Jup
  • KCTD3
  • KTN1
  • LAMTOR1
  • LBR
  • MAP3K11
  • MCF2
  • MCF2L
  • MYO9B
  • NGEF
  • OPHN1
  • PAK1
  • PAK2
  • PAK5
  • PAK6
  • PARD6A
  • PIK3R1
  • PIK3R2
  • PLD1
  • PLEKHG1
  • PLEKHG2
  • PLEKHG3
  • PREX1
  • PREX2
  • RAB7A
  • RACGAP1
  • RASGRF2
  • SCRIB
  • SH3PXD2A
  • SHKBP1
  • SNAP23
  • SRGAP1
  • SRGAP2
  • SRGAP3
  • STARD8
  • STEAP3
  • STOM
  • SYDE1
  • TAGAP
  • TFRC
  • TIAM1
  • TRIO
  • VAMP3
  • VANGL1
  • VAV2
  • WASL
  • WDR81
  • WDR91
  • WIPF1
  • YKT6
Sus scrofa (pig)
CASP8 activity is inhibited
  • APT1
  • CASP8
  • CASP9
  • FADD
  • FAS
  • RIPK1
  • TNFRSF6
  • TRADD
  • TRAF2
Sus scrofa (pig)
Biosynthesis of the N-glycan precursor (dolichol lipid-linked oligosaccharide, LLO) and transfer to a nascent protein
  • ALG1
  • ALG12
  • ALG14
  • ALG2
  • ALG3
  • ALG8
  • ALG9
  • DPAGT1
  • MPDU1
Sus scrofa (pig)
Basigin interactions
  • ATP1B1
  • ATP1B2
  • ATP1B3
  • BSG
  • CAV1
  • ITGA3
  • ITGA6
  • ITGB1
  • MAG
  • MMP1
  • PPIA
  • PPIL2
  • SLC16A3
  • SLC16A8
  • SLC3A2
  • SLC7A10
  • SLC7A11
  • SLC7A5
  • SLC7A7
  • SLC7A8
  • SLC7A9
  • SPN
Sus scrofa (pig)
Atorvastatin ADME
  • ABCC2
  • CYP3A22
  • CYP3A227
  • CYP3A29
  • LOC100522267
  • PON1
  • PON3
  • SLCO1B2
  • SLCO1B3
  • SLCO2B1
  • UGT1A6
Sus scrofa (pig)
Assembly of collagen fibrils and other multimeric structures
  • CD151
  • COL10A1
  • COL11A1
  • COL11A2
  • COL15A1
  • COL18A1
  • COL1A1
  • COL1A2
  • COL24A1
  • COL27A1
  • COL2A1
  • COL3A1
  • COL4A1
  • COL4A2
  • COL4A3
  • COL4A4
  • COL4A5
  • COL5A1
  • COL5A2
  • COL5A3
  • COL6A1
  • COL6A2
  • COL6A3
  • COL6A5
  • COL6A6
  • COL8A2
  • COL9A1
  • COL9A2
  • COL9A3
  • CTSB
  • CTSL
  • CTSL1
  • DST
  • ITGA6
  • ITGB4
  • LAMA3
  • MEGF6
  • MMP13
  • MMP20
  • MMP3
  • MMP7
  • MMP9
  • PLEC
Sus scrofa (pig)
Assembly of active LPL and LIPC lipase complexes
  • ANGPTL3
  • ANGPTL4
  • ANGPTL8
  • FURIN
  • LIPC
  • LMF1
  • LMF2
  • LPL
  • PCSK6
  • PGAR
Sus scrofa (pig)
Asparagine N-linked glycosylation
  • ASGR1
  • ASGR2
  • LOC110255214
  • UMOD
Sus scrofa (pig)
Arachidonic acid metabolism
  • FAAH
  • FAAH1
Sus scrofa (pig)
Apoptotic execution phase
  • BCAP31
  • CASP8
  • DNM1L
  • STK24
Sus scrofa (pig)
Apoptotic cleavage of cellular proteins
  • ACIN1
  • APC
  • BCAP31
  • BIRC2
  • BMX
  • CASP6
  • CASP7
  • CASP8
  • CLSPN
  • PRKCD
  • ROCK1
  • SATB1
  • STK24
Sus scrofa (pig)
Apoptotic cleavage of cell adhesion proteins
  • CDH1
  • CTNNB1
  • DSG1
  • DSG2
  • DSG3
  • DSP
  • OCLN
  • PKP1
  • TJP1
  • TJP2
Sus scrofa (pig)
Antimicrobial peptides
  • BPI
  • BPIFA1
  • BPIFA2
  • BPIFB1
  • BPIFB2
  • BPIFB4
  • CHGA
  • CLU
  • EPPIN
  • GNLY
  • LEAP2
  • LOC100154047
  • LOC100520832
  • LOC100624628
  • LOC102163838
  • LOC110255221
  • LOC110260309
  • LTF
  • PGLYRP1
  • PGLYRP2
  • PGLYRP3
  • PGLYRP4
  • PMAP-36
  • PRSS2
  • REG3G
  • try
Sus scrofa (pig)
Antigen Presentation: Folding, assembly and peptide loading of class I MHC
  • B2M
  • CALR
  • CANX
  • ERAP1
  • ERAP2
  • HSPA5
  • LOC100513601
  • PDIA3
  • SAR1B
  • SEC13
  • SEC23A
  • SEC24A
  • SEC24B
  • SEC24C
  • SEC24D
  • SEC31A
  • SLA-2
  • SLA-3
  • SLA-6
  • SLA-7
  • SLA-8
  • TAP1
  • TAP2
Sus scrofa (pig)
Antagonism of Activin by Follistatin
  • FST
  • INHBA
  • INHBB
Sus scrofa (pig)
Androgen biosynthesis
  • 3b-HSD
  • CGA
  • CYP17
  • CYP17A1
  • HSD17B12
  • HSD17B3
  • HSD3B
  • LHB
  • LOC100525350
  • POMC
  • SRD5A1
  • SRD5A2
  • ST5AR2
Sus scrofa (pig)
Amine ligand-binding receptors
  • GPR143
Sus scrofa (pig)
Aflatoxin activation and detoxification
  • ACY1
  • AKR7A2
  • CYP1A2
  • CYP2A19
  • CYP3A22
  • CYP3A227
  • CYP3A29
  • DPEP1
  • DPEP2
  • DPEP3
  • GGT1
  • GGT6
  • GGT7
  • GST12
  • MGST1
  • MGST2
  • MGST3
  • RDP
Sus scrofa (pig)
Advanced glycosylation endproduct receptor signaling
  • A4
  • AD1
  • AGER
  • APP
  • CAPZA1
  • CAPZA2
  • S100A12
  • S100B
Sus scrofa (pig)
Adrenoceptors
  • A2AR
  • ADRA1A
  • ADRA1B
  • ADRA1D
  • ADRA2A
  • ADRA2B
  • ADRA2C
  • ADRB1
  • ADRB2
  • ADRB3
  • BAR3
  • alpha-1A
Sus scrofa (pig)
Adrenaline,noradrenaline inhibits insulin secretion
  • A2AR
  • ADCY5
  • ADCY6
  • ADRA2A
  • ADRA2C
  • GNAI1
  • GNAI2
  • GNB1
  • GNB2
  • GNB3
  • GNB5
  • GNG10
  • GNG11
  • GNG12
  • GNG3
  • GNG4
  • GNG5
  • GNG7
  • GNG8
  • LOC100621431
  • LOC110255211
Sus scrofa (pig)
Adrenaline signalling through Alpha-2 adrenergic receptor
  • A2AR
  • ADRA2A
  • ADRA2B
  • ADRA2C
Sus scrofa (pig)

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Supported by JST NBDC Grant Number JPMJND2204

Partly supported by NIH Common Fund Grant #1U01GM125267-01


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Last updated: August 19, 2024