GlyCosmos Portal

GlyCosmos Pathways

Integrated of pathway data, containing glycoproteins and glycans obtained from Reactome and the Metabolism of carbohydrates in Escherichia coli O-antigens obtained from ECODAB. Search by pathway name, species, and protein name.

Source	Last Updated
Reactome	March 20, 2024
ECODAB	April 1, 2019

Displaying entries **26 - 50** of **360** in total

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Pathway Name	Protein Name	UniProt ID ▼	Gene Symbol	Organism	GlyTouCan ID
Sema4D mediated inhibition of cell attachment and migration	Hepatocyte growth factor receptor Plexin B1 RAS related Ras-related C3 botulinum toxin substrate 1 Rho GTPase-activating protein 35 Semaphorin 4D Transforming protein RhoA	A0A5K1TV69 A0A8W4FI56 F1RHW4 F1RM07 F1SLI0 I3LVS7 Q2QLE0	ARHGAP35 MET PLXNB1 RAC1 RHOA RRAS SEMA4D	Sus scrofa (pig)
Neurotransmitter release cycle	N-acylethanolamine-hydrolyzing acid amidase	A0A5G2R6W7	NAAA	Sus scrofa (pig)
RUNX1 regulates estrogen receptor mediated transcription	Core-binding factor subunit beta Estrogen receptor Runt-related transcription factor	A0A5G2R2L4 F8SIP5 Q29040	CBFB ESR ESR1 NR3A1 RUNX1	Sus scrofa (pig)
RUNX3 regulates CDKN1A transcription	Cellular tumor antigen p53 Mothers against decapentaplegic homolog 3 Mothers against decapentaplegic homolog 4 Runt-related transcription factor Transforming growth factor beta-1 proprotein Zinc finger homeobox 3	A0A5G2QVF3 F1S397 P07200 P84024 Q9GKQ9 Q9TUB2	MADH3 MADH4 P53 RUNX3 SMAD3 SMAD4 TGFB1 TP53 ZFHX3	Sus scrofa (pig)
Vitamin C (ascorbate) metabolism	Cytochrome b5 Glutathione S-transferase omega-1 NADH-cytochrome b5 reductase Solute carrier family 2, facilitated glucose transporter member 1 Solute carrier family 2, facilitated glucose transporter member 3 Solute carrier family 23 member 1	A0A5G2QPB6 I3LCS3 O62787 P00172 P20303 Q9N1F5	CYB5 CYB5A CYB5R3 GLUT1 GLUT3 GSTO1 SLC23A1 SLC2A1 SLC2A3	Sus scrofa (pig)
Costimulation by the CD28 family	Ig-like domain-containing protein Phosphatidylinositol 3-kinase regulatory subunit alpha isoform 2 Phosphatidylinositol 3-kinase regulatory subunit beta phosphatidylinositol-4,5-bisphosphate 3-kinase	A0A5G2QMX5 A0A5K1UB41 F1S916 F1SKR9	ICOSLG PIK3CA PIK3R1 PIK3R2	Sus scrofa (pig)
Ficolins bind to repetitive carbohydrate structures on the target cell surface	Ficolin (collagen/fibrinogen domain containing lectin) 2 (hucolin) Ficolin (collagen/fibrinogen domain containing) 1 MBL associated serine protease 1 MBL associated serine protease 2	A0A5G2QE59 A0A5G2QP75 A0A8W4FNY0 K7GKU8	FCN1 FCN2 MASP1 MASP2	Sus scrofa (pig)	G49108TO G57321FI
Galactose catabolism	Galactose-1-phosphate uridylyltransferase galactokinase	A0A5G2QDU1 F1S3U0	GALK1 GALT	Sus scrofa (pig)	G93924TT
Asparagine N-linked glycosylation	Asialoglycoprotein receptor 1 Asialoglycoprotein receptor 2 Glycosyltransferase 2-like domain-containing protein Uromodulin	A0A5G2Q826 A0A5G2QNB6 F1RPA9 I3L7N4	ASGR1 ASGR2 LOC110255214 UMOD	Sus scrofa (pig)
MET activates PTPN11	GRB2 associated binding protein 1 Growth factor receptor bound protein 2 Hepatocyte growth factor receptor Hepatocyte growth factor Tyrosine-protein phosphatase non-receptor type	A0A480LMF4 B6E241 F1SB93 K7GMT0 Q2QLE0	GAB1 GRB2 HGF MET PTPN11	Sus scrofa (pig)
Signal regulatory protein family interactions	FYN binding protein 1 Growth factor receptor bound protein 2 Ig-like domain-containing protein Ig-like domain-containing protein Ig-like domain-containing protein Ig-like domain-containing protein Leukocyte surface antigen CD47 Signal regulatory protein alpha Src kinase-associated phosphoprotein 2 TYRO protein tyrosine kinase-binding protein non-specific protein-tyrosine kinase	A0A480KBE3 A0A8W4FCP5 B6E241 F1RJS6 I3L932 K7GKB0 K7GL06 K7GLT9 M9MMN6 Q9GKE8 Q9TU45	CD47 DAP12 FYB1 GRB2 LOC100736623 LOC100739707 LOC102161654 PTK2B SIRPA SKAP2 TYROBP	Sus scrofa (pig)
Progressive trimming of alpha-1,2-linked mannose residues from Man9/8/7GlcNAc2 to produce Man5GlcNAc2	alpha-1,2-Mannosidase alpha-1,2-Mannosidase alpha-1,2-Mannosidase	A0A480JM90 A0A481C5C8 I3L826	MAN1A1 MAN1A2 MAN1C1	Sus scrofa (pig)	G70323CJ
MET activates STAT3	Hepatocyte growth factor receptor Hepatocyte growth factor Signal transducer and activator of transcription 3 Signal transducer and activator of transcription	A0A2C9F3G4 F1SB93 Q19S50 Q2QLE0	HGF MET STAT3	Sus scrofa (pig)
Interleukin-23 signaling	Interleukin 12 receptor subunit beta 1 Interleukin 23 receptor Interleukin-12 subunit beta Interleukin-23 subunit alpha Protein disulfide-isomerase Signal transducer and activator of transcription 3 Signal transducer and activator of transcription Signal transducer and activator of transcription Tyrosine-protein kinase JAK2 Tyrosine-protein kinase	A0A2C9F3G4 A0A5G2QAF8 A0A5G2R3H9 A0A5G2RDD7 E1U8C4 F1S3L9 O19064 Q19S50 Q28938 Q9N2H9	IL12B IL12RB1 IL23A IL23R JAK2 LOC100736717 P4HB SGRF STAT3 STAT4 TYK2 stat4	Sus scrofa (pig)
Adrenoceptors	Alpha-1A adrenergic receptor Alpha-1B adrenergic receptor Alpha-1D adrenergic receptor Alpha-1D adrenergic receptor Alpha-2A adrenergic receptor Alpha-2B adrenergic receptor Alpha-2C adrenergic receptor Beta-1 adrenergic receptor Beta-2 adrenergic receptor Beta-3 adrenergic receptor Beta-3 adrenergic receptor	A0A2C9F3F6 A7BJW1 F1RR36 F1S5H5 F1S8D0 I3LFJ1 P18871 Q38PT0 Q95252 Q9TSW7 Q9TTM9	A2AR ADRA1A ADRA1B ADRA1D ADRA2A ADRA2B ADRA2C ADRB1 ADRB2 ADRB3 BAR3 alpha-1A	Sus scrofa (pig)
Toll Like Receptor 7/8 (TLR7/8) Cascade	Toll like receptor 7	A0A288CG39	TLR7	Sus scrofa (pig)
Opsins	Long-wave-sensitive opsin 1 Melanopsin Opsin 5 Retinal G protein coupled receptor Retinal pigment epithelium-derived rhodopsin homolog Rhodopsin	A0A287BQI1 F1S135 F1SEP7 I3LTK7 O18766 Q5IR81	LOC494564 OPN4 OPN5 RGR RHO RHO1 RRH	Sus scrofa (pig)
RUNX3 regulates p14-ARF	Core-binding factor subunit beta G1/S-specific cyclin-D1 Histone deacetylase Runt-related transcription factor Transforming growth factor beta-1 proprotein histone acetyltransferase	A0A287BQF9 A0A287BRJ4 A0A5G2QVF3 A0A5G2R2L4 I3L9U8 P07200	CBFB CCND1 EP300 HDAC4 RUNX3 TGFB1	Sus scrofa (pig)
Cilium Assembly	Alpha-tubulin N-acetyltransferase 1 Histone deacetylase 6	A0A287BPX4 I3L925	ATAT1 HDAC6 MEC17	Sus scrofa (pig)
Antagonism of Activin by Follistatin	Follistatin Follistatin Inhibin beta A chain Inhibin beta B chain	A0A287BPF5 F1SLQ4 P03970 P10669	FST INHBA INHBB	Sus scrofa (pig)
CASP8 activity is inhibited	Caspase 9 Caspase-8 FAS-associated death domain protein Receptor interacting serine/threonine kinase 1 TNF receptor-associated factor Tumor necrosis factor receptor superfamily member 6 Tumor necrosis factor receptor superfamily member 6 Tumor necrosis factor receptor type 1-associated DEATH domain protein	A0A287BPE4 A0A287BRT1 F1RVZ4 F1SCY7 F1SUV9 O77736 Q56VC2 Q56VC3	APT1 CASP8 CASP9 FADD FAS RIPK1 TNFRSF6 TRADD TRAF2	Sus scrofa (pig)
MyD88-independent TLR4 cascade	Lymphocyte antigen 96 Monocyte differentiation antigen CD14 TIR domain-containing adapter molecule 1 TIR domain-containing adapter molecule 2 Toll-like receptor 4	A0A287BMU9 A0A480K9W0 A2SW51 A7BG67 K9J6H0	CD14 LY96 TICAM1 TICAM2 TLR4	Sus scrofa (pig)
Ligand-dependent caspase activation	Caspase-8 FAS-associated death domain protein Lymphocyte antigen 96 Monocyte differentiation antigen CD14 Receptor interacting serine/threonine kinase 1 TIR domain-containing adapter molecule 1 TIR domain-containing adapter molecule 2 Toll-like receptor 4	A0A287BMU9 A0A287BRT1 A0A480K9W0 A2SW51 A7BG67 K9J6H0 Q56VC2 Q56VC3	CASP8 CD14 FADD LY96 RIPK1 TICAM1 TICAM2 TLR4 TNFRSF6	Sus scrofa (pig)
Assembly of active LPL and LIPC lipase complexes	Angiopoietin like 3 Angiopoietin like 8 Angiopoietin-related protein 4 Hepatic triacylglycerol lipase Lipase maturation factor Lipase maturation factor Lipoprotein lipase Proprotein convertase subtilisin/kexin type 6 furin	A0A287BK80 A0A287BRD2 A0A480KVF0 F1RMJ1 F1RZ92 F1RZH2 F1S7Z7 Q2TNK5 T1UNN8	ANGPTL3 ANGPTL4 ANGPTL8 FURIN LIPC LMF1 LMF2 LPL PCSK6 PGAR	Sus scrofa (pig)
Signaling by Type 1 Insulin-like Growth Factor 1 Receptor (IGF1R)	Cartilage intermediate layer protein Insulin-like growth factor I Insulin-like growth factor II Insulin-like growth factor II Tyrosine-protein kinase receptor	A0A287BJL7 A0A287BRX8 F1CK17 P16545 P23695	CILP IGF1 IGF1R IGF2	Sus scrofa (pig)

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