GlyCosmos Pathways

Integrated of pathway data, containing glycoproteins and glycans obtained from Reactome and the Metabolism of carbohydrates in Escherichia coli O-antigens obtained from ECODAB. Search by pathway name, species, and protein name.

Source Last Updated
Reactome March 20, 2024
ECODAB April 1, 2019
Displaying entries 126 - 150 of 360 in total
Pathway Name Protein Name ▼ UniProt ID Gene Symbol Organism GlyTouCan ID
TGF-beta receptor signaling in EMT (epithelial to mesenchymal transition)
  • ARHGEF18
  • CGN
  • F11R
  • PARD3
  • PARD6A
  • PRKCZ
  • RHOA
  • RPS27A
  • SMURF1
  • TGFB1
  • TGFBR1
  • TGFBR2
  • UBA52
  • UBB
  • UBC
Sus scrofa (pig)
Formation of the cornified envelope
  • CDSN
  • CELA2A
  • DSC1
  • DSC2
  • DSC3
  • DSG1
  • DSG2
  • DSG3
  • DSG4
  • DSP
  • ELA2
  • ELA2A
  • EVPL
  • JUP
  • Jup
  • KAZN
  • KLK12
  • KLK14
  • KLK5
  • LOC396866
  • PERP
  • PKP1
  • PKP2
  • PKP3
  • PKP4
  • PPL
  • RPTN
  • SPINK5
  • SPINK9
  • TCHH
  • TGM1
Sus scrofa (pig)
Transport of bile salts and organic acids, metal ions and amine compounds
  • CTL2
  • CTL4
  • SLC10A6
  • SLC14A1
  • SLC14A2
  • SLC44A1
  • SLC44A2
  • SLC44A3
  • SLC44A4
  • SLC47A1
  • SLC47A2
  • TPPT1
Sus scrofa (pig)
RUNX3 regulates CDKN1A transcription
  • MADH3
  • MADH4
  • P53
  • RUNX3
  • SMAD3
  • SMAD4
  • TGFB1
  • TP53
  • ZFHX3
Sus scrofa (pig)
Activation of Matrix Metalloproteinases
  • COL18A1
  • CTSK
  • CTSL
  • CTSL1
  • FURIN
  • KLK1
  • LOC100154047
  • MMP1
  • MMP11
  • MMP13
  • MMP15
  • MMP16
  • MMP17
  • MMP24
  • MMP25
  • MMP3
  • MMP7
  • MMP8
  • MMP9
  • PLG
  • PRSS2
  • SPOCK3
  • TIMP1
  • TIMP2
  • try
Sus scrofa (pig)
RUNX1 regulates transcription of genes involved in differentiation of keratinocytes
  • CTSK
  • CTSL
Sus scrofa (pig)
Assembly of collagen fibrils and other multimeric structures
  • CD151
  • COL10A1
  • COL11A1
  • COL11A2
  • COL15A1
  • COL18A1
  • COL1A1
  • COL1A2
  • COL24A1
  • COL27A1
  • COL2A1
  • COL3A1
  • COL4A1
  • COL4A2
  • COL4A3
  • COL4A4
  • COL4A5
  • COL5A1
  • COL5A2
  • COL5A3
  • COL6A1
  • COL6A2
  • COL6A3
  • COL6A5
  • COL6A6
  • COL8A2
  • COL9A1
  • COL9A2
  • COL9A3
  • CTSB
  • CTSL
  • CTSL1
  • DST
  • ITGA6
  • ITGB4
  • LAMA3
  • MEGF6
  • MMP13
  • MMP20
  • MMP3
  • MMP7
  • MMP9
  • PLEC
Sus scrofa (pig)
Trafficking and processing of endosomal TLR
  • CNPY3
  • CTSB
  • CTSK
  • CTSL
  • CTSL1
  • HSP90B1
  • LGMN
  • TLR7
  • TLR8
  • TLR9
  • TNRC5
  • UNC93B1
Sus scrofa (pig)
FasL/ CD95L signaling
  • APT1
  • CASP8
  • FADD
  • FAS
  • TNFRSF6
Sus scrofa (pig)
Ligand-dependent caspase activation
  • CASP8
  • CD14
  • FADD
  • LY96
  • RIPK1
  • TICAM1
  • TICAM2
  • TLR4
  • TNFRSF6
Sus scrofa (pig)
CASP8 activity is inhibited
  • APT1
  • CASP8
  • CASP9
  • FADD
  • FAS
  • RIPK1
  • TNFRSF6
  • TRADD
  • TRAF2
Sus scrofa (pig)
Dimerization of procaspase-8
  • APT1
  • CASP8
  • CASP9
  • FADD
  • FAS
  • LOC100624226
  • LOC100737977
  • RIPK1
  • TNFRSF6
  • TRADD
  • TRAF2
Sus scrofa (pig)
Regulation by c-FLIP
  • APT1
  • CASP8
  • CASP9
  • FADD
  • FAS
  • LOC100624226
  • LOC100737977
  • RIPK1
  • TNFRSF6
  • TRADD
  • TRAF2
Sus scrofa (pig)
Interleukin-1 processing
  • CASP1
  • GSDMD
  • IGIF
  • IL18
  • IL1A
  • IL1B
  • IL1B2
  • LOC100154047
  • LOC110255300
  • LOC110258125
  • LOC110258578
  • LOC110259156
  • NFKB1
  • NFKB2
  • NFKB2_tv2
  • RELA
Sus scrofa (pig)
Signaling by Type 1 Insulin-like Growth Factor 1 Receptor (IGF1R)
  • CILP
  • IGF1
  • IGF1R
  • IGF2
Sus scrofa (pig)
Class A/1 (Rhodopsin-like receptors)
  • CMLKR1
  • CNR1
  • CNR2
  • GPBAR1
  • GPR132
  • GPR18
  • GPR183
  • GPR35
  • GPR39
  • GPR55
  • GPR68
  • HCAR2
  • MTNR1A
  • MTNR1B
  • PTAFR
  • SUCNR1
Sus scrofa (pig)
Calnexin/calreticulin cycle
  • CALR
  • CANX
  • PDIA3
Sus scrofa (pig)
Extra-nuclear estrogen signaling
  • CALM3
  • CAV1
  • CAV2
  • DTR
  • ESR
  • ESR1
  • ESR2
  • GNAI1
  • GNAI2
  • GNAI3
  • GNB1
  • GNB2
  • GNB3
  • GNB5
  • GNG10
  • GNG11
  • GNG12
  • GNG3
  • GNG4
  • GNG5
  • GNG7
  • GNG8
  • HBEGF
  • HEGFL
  • HSP90A
  • HSP90AA1
  • HSPCA
  • IGF1R
  • LOC100621431
  • LOC110255211
  • MMP3
  • MMP7
  • MMP9
  • NOS3
  • NR3A1
  • PIK3CA
  • PIK3R1
  • PIK3R2
  • PRMT1
  • S1PR3
  • SHC1
  • SPHK1
  • SRC
  • STRN
Sus scrofa (pig)
Inactivation, recovery and regulation of the phototransduction cascade
  • CALM3
  • CAMKMT
  • CNGA1
  • CNGB1
  • GNB5
  • GRK1
  • GRK4
  • GRK7
  • GUCA1B
  • GUCY2D
  • METAP1
  • METAP2
  • NMT1
  • NMT2
  • PDE6A
  • PDE6G
  • PPEF1
  • RCVRN
  • RGS9
  • RGS9BP
  • RHO
  • RHO1
Sus scrofa (pig)
Interferon gamma signaling
  • CAMK2A
  • CAMK2B
  • CAMK2D
  • CAMK2G
  • IFNG
  • IFNGR1
  • IFNGR2
  • JAK1
  • JAK2
  • MAPK1
  • MAPK3
  • PRKCD
  • SOCS1
  • SOCS3
  • STAT1
  • socs1
Sus scrofa (pig)
Apoptotic cleavage of cell adhesion proteins
  • CDH1
  • CTNNB1
  • DSG1
  • DSG2
  • DSG3
  • DSP
  • OCLN
  • PKP1
  • TJP1
  • TJP2
Sus scrofa (pig)
RHOBTB1 GTPase cycle
  • CCT2
  • COPS2
  • COPS4
  • CPSF7
  • CUL3
  • GPS1
  • HNRNPC
  • MYO6
  • PDE5A
  • RBBP6
  • RHOBTB1
  • ROCK1
  • ROCK2
  • SRRM1
  • STK38
  • TRA2B
  • TXNL1
  • VIM
Sus scrofa (pig)
SMAD2/SMAD3:SMAD4 heterotrimer regulates transcription
  • CCNC
  • CCNK
  • CCNT1
  • CCNT2
  • CDK8
  • CDK9
  • E2F4
  • E2F5
  • FURIN
  • MADH3
  • MADH4
  • MAPK1
  • MAPK3
  • MEN1
  • RBL1
  • RNF111
  • RPS27A
  • SMAD2
  • SMAD3
  • SMAD4
  • SMAD7
  • SP1
  • Smad7
  • TFDP1
  • UBA52
  • UBB
  • UBC
  • WWTR1
Sus scrofa (pig)
Estrogen-dependent gene expression
  • CARM1
  • CBFB
  • CCNT1
  • CDK9
  • CITED1
  • CREBBP
  • DDX5
  • EP300
  • ERBB4
  • ESR
  • ESR1
  • FKBP4
  • FOS
  • FOXA1
  • GATA3
  • GREB1
  • GTF2A1
  • GTF2A2
  • GTF2F1
  • H1-2
  • H2AB1
  • H2AB2
  • H2AB3
  • H2AC10
  • H2AC11
  • H2AC17
  • H2AC18
  • H2AC19
  • H2AC20
  • H2AC4
  • H2AC6
  • H2AC7
  • H2AC8
  • H2AX
  • H2AZ2
  • H2BC11
  • H2BC12
  • H2BC19
  • H2BC20
  • H2BC21
  • H2BC5
  • H3-3A
  • H3C12
  • H3C14
  • H3C15
  • H3C4
  • H3C6
  • H3F3A
  • HDAC1
  • HIST1H2BD
  • HIST1H3E
  • HSP90A
  • HSP90AA1
  • HSP90AB1
  • HSPCA
  • JUN
  • KAT2B
  • KAT5
  • KDM1A
  • KDM4B
  • LOC110261482
  • MED1
  • NCOA1
  • NCOA2
  • NCOA3
  • NR3A1
  • NR5A2
  • NRIP1
  • PGR
  • POLR2A
  • POLR2B
  • POLR2D
  • POLR2E
  • POLR2G
  • POLR2H
  • POLR2I
  • POLR2J
  • POLR2L
  • POU2F1
  • PRMT1
  • PTGES3
  • RUNX1
  • SP1
  • TLE3
  • USF1
  • USF2
  • YY1
  • ZNF217
Sus scrofa (pig)
Regulation of Complement cascade
  • C1QA
  • C1QB
  • C1QC
  • C1R
  • C1S
  • C2
  • C3
  • C4A
  • C5
  • C5AR1
  • C5AR2
  • C6
  • C7
  • C8A
  • C8B
  • C8G
  • C9
  • CD55
  • CD59
  • CD81
  • CFB
  • CFH
  • CFI
  • CLU
  • CPB2
  • CPN1
  • CPN2
  • F2
  • IGKV5-2
  • LOC100125542
  • LOC100523213
  • SERPING1
  • VTN
Sus scrofa (pig)

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Last updated: August 19, 2024