Submissions
GlyTouCan
Glycan Structure Repository
GlyComb
Glycoconjugate Repository
GlycoPOST
Glycomics MS raw data Repository
UniCarb-DR
Glycomics MS Repository for glycan annotations from GlycoWorkbench
LM-GlycoRepo
Repository for lectin-assisted multimodality data
All Resources
Genes / Proteins / Lipids Glycans / Glycoconjugates Glycomes Pathways / Interactions / Diseases / OrganismsTools
SugarDrawer
GlycanBuilder
Glycan Converters
GlycoMaple
GlycomeAtlas
LM-GlycomeAtlas
GALAXY
MCAW
GlycoSim
GRable
Guidelines
MIRAGE
CBM50
Summary
- CAZy
- CBM50
- Family
- Carbohydrate-Binding Module Family 50
- Activities
-
- Modules of approx. 50 residues found attached to various enzymes from families GH18, GH19, GH23, GH24, GH25 and GH73, i.e. enzymes cleaving either chitin or peptidoglycan. Binding to chitopentaose demonstrated in the case of Pteris ryukyuensis chitinase A [Ohnuma T et al. (2008) J. Biol. Chem. 283:5178-87 (PMID: 18083709)]. CBM50 modules are also found in a multitude of other enzymes targeting the petidoglycan such as peptidases and amidases. These enzymes are not reported in the list below.
Protein List
| GenBank | Organism | UniProt ID | Protein Name | Gene ID | Enzyme |
|---|---|---|---|---|---|
| ASF00795.1 | A0A218MNE4 | LysM domain-containing protein | |||
| QHJ78355.1 | A0A6G5Y1H6 | lysozyme | 3.2.1.17 | ||
| QHJ84537.1 | A0A6G5YJZ1 | lysozyme | 3.2.1.17 | ||
| QHJ77180.1 | A0A6G5XZJ6 | lysozyme | 3.2.1.17 | ||
| QHJ84983.1 | A0A6G5YLY5 | N-acetylmuramoyl-L-alanine amidase | 3.5.1.28 | ||
| QHJ77795.1 | A0A6G5XZW6 | lysozyme | 3.2.1.17 | ||
| QHJ77966.1 | A0A6G5Y1R5 | lysozyme | 3.2.1.17 | ||
| QHJ78311.1 | A0A6G5Y2V4 | LysM domain-containing protein | |||
| QHJ84846.1 | A0A6G5YLE7 | LysM domain-containing protein | |||
| UGC97986.1 | A0AAE9C8F6 | LysM domain protein | |||
| QHJ75994.1 | A0A6G5XUA3 | LysM domain protein | |||
| WAK79555.1 | A0AA49E3U4 | Tail protein | |||
| QHJ82951.1 | A0A6G5YG40 | LysM domain-containing protein | |||
| QHJ78298.1 | A0A6G5Y362 | LysM domain-containing protein | |||
| QHJ77589.1 | A0A6G5XZN9 | LysM domain-containing protein | |||
| QHJ76532.1 | A0A6G5XWC6 | LysM domain-containing protein | |||
| WAK79539.1 | A0AA49E416 | Endolysin | |||
| QHJ77112.1 | A0A6G5XY15 | LysM domain-containing protein | |||
| WAK79315.1 | A0AA49E3G5 | Tail length tape measure protein | |||
| AFB75734.1 | H7BV89 | LysM domain-containing protein | |||
| AFB76124.1 | H7BWC9 | LysM domain-containing protein | |||
| QHJ84859.1 | A0A6G5YKD0 | LysM domain-containing protein | |||
| QHJ77125.1 | A0A6G5XY10 | LysM domain protein | |||
| QHJ76581.1 | A0A6G5XXY4 | LysM domain-containing protein | |||
| WAK79598.1 | A0AA49I7H3 | Endolysin |
| GenBank | Organism | UniProt ID | Protein Name | Gene ID | Enzyme |
|---|---|---|---|---|---|
| AMY10234.1 | A0A143PQZ9 | Membrane-bound lytic murein transglycosylase D | 4.2.2.- | ||
| AMY07899.1 | A0A143PJF1 | LysM domain/BON superfamily protein | |||
| AOE06207.1 | A0A1B2YNS0 | Peptidoglycan hydrolase | |||
| ALS90357.1 | A0A0U2YKI3 | LysM domain protein | |||
| AOE10471.1 | A0A1B2Z0X0 | Membrane-bound lytic murein transglycosylase D, glycoside hydrolase family GH23/CBM50 | |||
| AQS30310.1 | A0A1S6H428 | LysM domain-containing protein | |||
| AOE06925.1 | A0A1B2YQR1 | LysM-repeat proteins and domains | |||
| AOO54648.1 | A0A1C9HA52 | Peptidase m23 | |||
| AMP57221.1 | A0A127T526 | LysM domain protein | |||
| APO29183.1 | A0A1L5KM86 | Murein hydrolase activator NlpD (Fragment) | |||
| AOE05863.1 | A0A1B2YMR0 | Peptidoglycan-binding protein LysM, carbohydrate-binding module family CBM50 | |||
| AOE08602.1 | A0A1B2YVG8 | Peptidoglycan hydrolase | |||
| AQS31150.1 | A0A1S6H5G0 | LysM domain-containing protein | |||
| AOE11503.1 | A0A1B2Z3T3 | Peptidoglycan hydrolase | |||
| AMP57209.1 | A0A127T4J1 | LysM domain protein (Fragment) | |||
| AOE06613.1 | A0A1B2YPW4 | Peptidoglycan hydrolase | |||
| APO26620.1 | A0A1L5KEW9 | Helix-turn-helix domain (Fragment) | |||
| AOE06071.1 | A0A1B2YNC4 | Membrane-bound lytic murein transglycosylase D, glycoside hydrolase family GH23/CBM50 | |||
| AOE09448.1 | A0A1B2YXZ1 | Membrane-bound lytic murein transglycosylase D, glycoside hydrolase family GH23/CBM50 | |||
| AIA10574.1 | A0A059WS70 | LysM domain protein | |||
| AOE13702.1 | A0A1B2ZA18 | Membrane-bound lytic murein transglycosylase D, glycoside hydrolase family GH23/CBM50 | |||
| AMP57279.1 | A0A127T4R0 | LysM domain protein | |||
| APO31600.1 | A0A1L5KU36 | Glycosyl hydrolases family 18 | |||
| AOE06822.1 | A0A1B2YQD9 | Peptidoglycan-binding protein LysM, carbohydrate-binding module family CBM50 | |||
| ART39957.1 | A0A1Y0BMW7 | J153 |
| GenBank | Organism | UniProt ID | Protein Name | Gene ID | Enzyme |
|---|---|---|---|---|---|
| CBH39154.1 | D1JAM4 | LysM domain-containing protein | |||
| AQS31177.1 | A0A1S6H6N7 | LysM domain-containing protein | |||
| QBM02369.1 | A0A482D7M4 | LysM domain-containing protein | |||
| QBM01973.1 | A0A482D6K3 | LysM domain-containing protein | |||
| QNO51312.1 | A0A7G9YTH8 | LysM domain-containing protein | |||
| QNO57839.1 | A0A7G9ZC55 | LysM domain-containing protein | |||
| QNO51031.1 | A0A7G9YSP7 | LysM domain-containing protein | |||
| WNY26187.1 | A0AA96V414 | LysM domain-containing protein | |||
| QSW86716.1 | A0A8A2UDF0 | LysM peptidoglycan-binding domain-containing protein | |||
| QIB76104.1 | A0A482SZ76 | LysM peptidoglycan-binding domain-containing protein | 9989474 | ||
| QCW02000.1 | A0A4P9TEA2 | LysM peptidoglycan-binding domain-containing protein | 40335023 | ||
| QCC51224.1 | A0A4D6HAW9 | LysM peptidoglycan-binding domain-containing protein | 39847836 | ||
| ARS89004.1 | A0A2Z2HVD9 | Peptidoglycan-binding protein | |||
| QIT56019.1 | A0A6H0IX97 | N-acetylmuramoyl-L-alanine amidase | 3.5.1.28 | ||
| QIT55572.1 | A0A6H0IWA8 | Peptidoglycan DD-metalloendopeptidase family protein | |||
| QIT54403.1 | A0A6H0ISP5 | LysM peptidoglycan-binding domain-containing protein | |||
| QIT57058.1 | A0A6H0J0J0 | LysM peptidoglycan-binding domain-containing protein | |||
| UVS70271.1 | A0A977IGE9 | Discoidin domain-containing protein | 74946401 | ||
| AIC15373.1 | A0A060HIM2 | Peptidoglycan-binding lysin domain and 3D domain protein | 74946401 | ||
| ADQ69178.1 | E4NVV8 | LysM domain-containing protein | 9989474 | ||
| AFU57159.1 | K0ILL7 | Peptidoglycan-binding lysin domain-containing protein | |||
| ADD04356.1 | D3SZZ8 | LysM domain protein | 8823599 | ||
| WIV66069.1 | A0A9Y1Z6M9 | Phage tail protein | |||
| AGB14782.1 | L0IA23 | LysM domain-containing protein | |||
| AFO55272.1 | I7BGD0 | Peptidoglycan-binding lysin domain-containing protein | 13352278 |
| GenBank | Organism | UniProt ID | Protein Name | Gene ID | Enzyme |
|---|---|---|---|---|---|
| QDZ25955.1 | A0A5B8N265 | lysozyme | 3.2.1.17 | ||
| QDZ25855.1 | A0A5B8N1X2 | LysM domain-containing protein | |||
| QDZ25444.1 | A0A5B8N0Y3 | LysM domain-containing protein | |||
| QDZ25247.1 | A0A5B8MXI6 | LysM domain-containing protein | |||
| QDZ19665.1 | A0A5B8MJ21 | LysM domain-containing protein | |||
| BDA50379.1 | A0A8J9WSL9 | Probable serine/threonine-protein kinase DDB_G0281745 at C-terminar half | |||
| BDA42061.1 | A0A8J9RB01 | Probable acidic endochitinase at C-terminar half | |||
| AAC13727.1 | O65213 | Chitinase | |||
| QFQ66285.1 | A0A5P8I3I8 | Chitin-binding LysM effector | |||
| QFQ66280.1 | A0A5P8I3K4 | Chitin-binding LysM effector | |||
| AMJ52410.1 | A0A140D097 | LysM domain-containing protein | |||
| CDS04122.1 | A0A077W9W9 | LysM domain-containing protein | |||
| QFQ66284.1 | A0A5P8I3J9 | Chitin-binding LysM effector | |||
| QFQ66288.1 | A0A5P8I3K8 | Chitin-binding LysM effector | |||
| QFQ66283.1 | A0A5P8I3K1 | Chitin-binding LysM effector | |||
| CDS12256.1 | A0A077WX92 | LysM domain-containing protein | |||
| QFQ66281.1 | A0A2N0QEN0 | Chitin-binding LysM effector | |||
| QFQ66279.1 | A0A2N1MEM7 | Chitin-binding LysM effector | |||
| CDS10896.1 | A0A077WTH4 | LysM domain-containing protein | |||
| QFQ66282.1 | A0A2N0QEN0 | Chitin-binding LysM effector | |||
| QFQ66287.1 | A0A5P8I3K5 | Chitin-binding LysM effector | |||
| QFQ66286.1 | A0A5P8I3K7 | Chitin-binding LysM effector | |||
| WFD39539.1 | A0AAF0JB60 | LysM domain-containing protein | |||
| CDU25617.1 | A0A127ZIZ0 | LysM domain-containing protein | |||
| WFD14131.1 | A0AAJ5YW94 | Uncharacterized protein |
