Category | Data | Updated | Size | File |
---|---|---|---|---|
GlyCosmos Genes
|
List of all GlyCosmos Genes data. Gene Symbol Alias symbol Gene ID GGDB ID FGDB ID KEGG ID LM ID DO ID DO Term Species Taxonomy ID |
July 30, 2024 | 32.24 MB | Download (.csv) |
GlycoGene Database (GGDB)
|
List of genes associated with glycan synthesis, related glycans and literature in the GlycoGene Database (GGDB). Gene ID Gene Symbol GGDB ID Reaction Acceptor Product PubMed |
January 25, 2018 | 72.67 KB | Download (.csv) |
GlyCosmos Glycoproteins
|
List of all GlyCosmos Glycoproteins data. UniProt ID Protein Name Gene Symbol Alias Symbols Organism No. of Glycosylation Sites GlyTouCan IDs DO ID DO Term |
July 30, 2024 | 13.69 MB | Download (.csv) |
GlyCosmos Glycoproteins
|
List of modified glycans of GlyCosms Glycoproteins. Protein Name UniProt ID Organism Site GlyTouCan IDs Source DB |
June 6, 2024 | 15.74 MB | Download (.csv) |
GlyCosmos Glycoproteins
|
List of the No. of Glycosylation Sites and No. of GlyTouCan IDs in GlyCosms glycoprotein. UniProt ID UniProt ID Glycosylation information |
June 6, 2024 | 5.45 MB | Download (.tsv) |
GlyCosmos Lectins
|
List of all GlyCosmos Lectins data. GlyCosmos Lectin Number Lectin Name Short name UniProt ID PDB IDs LfDB ID Monosaccharide Specificity Organism Taxonomy ID MCAW IDs |
June 5, 2024 | 537.11 KB | Download (.csv) |
GlyCosmos Lectins
|
List of lectins and high affinity glycans in the Lectin Frontier DataBase (LfDB). GlyCosmos Lectin Number LfDB ID Short name Pfam Labels Specificities Organism GlyTouCan ID Value |
June 5, 2024 | 262.8 KB | Download (.csv) |
GlyCosmos Lectins
|
List of lectins and high affinity glycans in the CarboGrove. GlyCosmos Lectin Number UniProt ID ResultID DataID DataSource Provider Concentration GlyTouCan ID BindingIntensity Stdev |
June 5, 2024 | 15.12 MB | Download (.csv) |
GlyCosmos Glycolipids
|
List of all GlyCosmos Glycolipids data. Category Main Class Sub Class LM ID(LIPID MAPS) Common Name LIPIDBANK ID KEGG ID PubChem CID CHEBI ID Exact Mass Formula |
June 16, 2024 | 1.55 MB | Download (.csv) |
GlyCosmos Glycans
|
List of all GlyCosmos Glycans data. Accession Number IUPAC Condensed WURCS Monoisotopic mass Motif name(s) Subsumption ChEBI PubChem CID Taxonomy GlycomeAtlas(Taxonomy:Tissue(UBERON ID)) |
August 18, 2024 | 73.52 MB | Download (.csv) |
GlyCosmos Glycans
|
List of glycans and subsumption level. WURCS(parent) GlyTouCan(parent) SubsumptionLevel(parent) WURCS(child) GlyTouCan(child) SubsumptionLevel(child) |
August 18, 2024 | 94.35 MB | Download (.csv) |
GlyCosmos Glycans
|
List of glycans and site of localization in the GlycomeAtlas. GlyTouCan ID Taxonomy Taxonomy ID Tissue DOI PMID |
July 31, 2023 | 68.04 KB | Download (.csv) |
GlyCosmos Glycans
|
List of glycans and organism. This list contains the results obtained by inference. GlyTouCan ID Taxonomy Taxonomy ID Rank Evidence Evidence id Annotation |
March 7, 2024 | 20.23 MB | Download (.csv) |
GlyCosmos Glycans
|
List of glycans and core proteins. GlyTouCan ID UniProt IDs of core proteins |
June 5, 2024 | 610.42 KB | Download (.csv) |
GlyCosmos Glycans
|
List of GlyTouCan ID and WURCS. GlyTouCan ID WURCS |
August 18, 2024 | 52.57 MB | Download (.csv) |
GlyCosmos Glycans
|
List of archived GlyTouCan IDs. ArchiveNumber AccessionNumber |
August 18, 2024 | 17.21 KB | Download (.csv) |
GlyCosmos Glycans
|
List of archived GlyTouCan IDs and replaced GlyTouCan IDs. ArchiveNumber |
August 18, 2024 | 31.11 KB | Download (.csv) |
Glycan Images
|
SNFG PNG image files |
August 18, 2024 | 912.14 MB | Download (.zip) |
Glycan Images
|
SNFG SVG image files |
August 18, 2024 | 807.98 MB | Download (.zip) |
GlyCosmos Pathways
|
List of all GlyCosmos Pathways data. Reactome ID |
March 20, 2024 | 144.52 KB | Download (.csv) |
GlyCosmos Pathways
|
List of pathways to which glycoproteins are associated and glycoproteins . Reactome ID Glycoprotein |
March 20, 2024 | 1.23 MB | Download (.csv) |
GlyCosmos Pathways
|
List of pathways to which glycan are associated and glycans. Reactome ID KEGG ChEBI GlyTouCan |
March 20, 2024 | 27.67 KB | Download (.csv) |
GlyCosmos Diseases
|
List of all GlyCosmos Diseases data. Disease ID Disease Name Gene Symbol Gene ID |
June 27, 2024 | 1.77 MB | Download (.csv) |
Glyco-Disease Genes Database (GDGDB)
|
List of glycan-related diseases and their responsible genes in the Glyco-Disease Genes Database (GDGDB). Concept UI Disease Name Gene Symbol Alias Disease Name Disease Type UniProt ID MeSH OMIM DO |
April 3, 2024 | 27.54 KB | Download (.csv) |
Glyco-Disease Genes Database (GDGDB)
|
List of genes, glycan-related diseases and publication in the Glyco-Disease Genes Database (GDGDB). Gene ID Gene Symbol Concept UI PubMed |
January 24, 2017 | 6.9 KB | Download (.csv) |
GlyCosmos is a member of the GlySpace Alliance together with GlyGen and Glycomics@ExPASy.
Supported by JST NBDC Grant Number JPMJND2204
Partly supported by NIH Common Fund Grant #1U01GM125267-01
GlyCosmos Portal v4.0.0
Last updated: August 19, 2024