GlyCosmos Portal

Annotation

Keyword

Alternative splicing
Congenital muscular dystrophy
Disease variant
Dystroglycanopathy
Endoplasmic reticulum
Glycoprotein
Glycosyltransferase
Limb-girdle muscular dystrophy
Lissencephaly
Metal-binding
Reference proteome
Repeat
Transmembrane helix

Proteins

Displaying **all 2** entries
UniProt	Protein Name
Q9Y6A1	Dolichyl-phosphate-mannose--protein mannosyltransferase 1
A0A140VKE0

Annotation information from UniProt.

Gene Ontology (GO)

Displaying **all 4** entries
GO Term	Evidence Code	PMID
positive regulation of protein O-linked glycosylation	IEA
protein O-linked glycosylation	TAS	10366449
extracellular matrix organization	IEA
protein O-linked mannosylation	IMP	28512129

GO Hierarchy

biological process

metabolic process [inference]

nitrogen compound metabolic process [inference]

organonitrogen compound metabolic process [inference]

protein metabolic process [inference]

protein modification process [inference]

protein glycosylation [inference]

protein O-linked glycosylation

protein O-linked mannosylation

protein mannosylation [inference]

protein O-linked mannosylation

primary metabolic process [inference]

protein metabolic process [inference]

protein modification process [inference]

protein glycosylation [inference]

protein O-linked glycosylation

protein O-linked mannosylation

protein mannosylation [inference]

protein O-linked mannosylation

glycosylation [inference]

macromolecule glycosylation [inference]

protein glycosylation [inference]

protein O-linked glycosylation

protein O-linked mannosylation

protein mannosylation [inference]

protein O-linked mannosylation

mannosylation [inference]

protein mannosylation [inference]

protein O-linked mannosylation

organic substance metabolic process [inference]

macromolecule metabolic process [inference]

protein metabolic process [inference]

protein modification process [inference]

protein glycosylation [inference]

protein O-linked glycosylation

protein O-linked mannosylation

protein mannosylation [inference]

protein O-linked mannosylation

macromolecule modification [inference]

protein modification process [inference]

protein glycosylation [inference]

protein O-linked glycosylation

protein O-linked mannosylation

protein mannosylation [inference]

protein O-linked mannosylation

macromolecule glycosylation [inference]

protein glycosylation [inference]

protein O-linked glycosylation

protein O-linked mannosylation

protein mannosylation [inference]

protein O-linked mannosylation

organonitrogen compound metabolic process [inference]

protein metabolic process [inference]

protein modification process [inference]

protein glycosylation [inference]

protein O-linked glycosylation

protein O-linked mannosylation

protein mannosylation [inference]

protein O-linked mannosylation

cellular process [inference]

cellular component organization or biogenesis [inference]

cellular component organization [inference]

extracellular structure organization [inference]

extracellular matrix organization

external encapsulating structure organization [inference]

extracellular matrix organization

biological regulation [inference]

regulation of biological process [inference]

regulation of metabolic process [inference]

regulation of biosynthetic process [inference]

positive regulation of biosynthetic process [inference]

positive regulation of cellular biosynthetic process [inference]

positive regulation of macromolecule biosynthetic process [inference]

positive regulation of glycoprotein biosynthetic process [inference]

positive regulation of protein glycosylation [inference]

positive regulation of protein O-linked glycosylation

regulation of cellular biosynthetic process [inference]

regulation of macromolecule biosynthetic process [inference]

positive regulation of macromolecule biosynthetic process [inference]

positive regulation of glycoprotein biosynthetic process [inference]

positive regulation of protein glycosylation [inference]

positive regulation of protein O-linked glycosylation

regulation of glycoprotein biosynthetic process [inference]

positive regulation of glycoprotein biosynthetic process [inference]

positive regulation of protein glycosylation [inference]

positive regulation of protein O-linked glycosylation

regulation of protein glycosylation [inference]

positive regulation of protein glycosylation [inference]

positive regulation of protein O-linked glycosylation

regulation of protein O-linked glycosylation [inference]

positive regulation of protein O-linked glycosylation

positive regulation of cellular biosynthetic process [inference]

positive regulation of macromolecule biosynthetic process [inference]

positive regulation of glycoprotein biosynthetic process [inference]

positive regulation of protein glycosylation [inference]

positive regulation of protein O-linked glycosylation

positive regulation of metabolic process [inference]

positive regulation of biosynthetic process [inference]

positive regulation of cellular biosynthetic process [inference]

positive regulation of macromolecule biosynthetic process [inference]

positive regulation of glycoprotein biosynthetic process [inference]

positive regulation of protein glycosylation [inference]

positive regulation of protein O-linked glycosylation

positive regulation of macromolecule metabolic process [inference]

positive regulation of macromolecule biosynthetic process [inference]

positive regulation of glycoprotein biosynthetic process [inference]

positive regulation of protein glycosylation [inference]

positive regulation of protein O-linked glycosylation

positive regulation of protein metabolic process [inference]

positive regulation of protein modification process [inference]

positive regulation of protein glycosylation [inference]

positive regulation of protein O-linked glycosylation

positive regulation of glycoprotein metabolic process [inference]

positive regulation of glycoprotein biosynthetic process [inference]

positive regulation of protein glycosylation [inference]

positive regulation of protein O-linked glycosylation

positive regulation of cellular metabolic process [inference]

positive regulation of cellular biosynthetic process [inference]

positive regulation of macromolecule biosynthetic process [inference]

positive regulation of glycoprotein biosynthetic process [inference]

positive regulation of protein glycosylation [inference]

positive regulation of protein O-linked glycosylation

positive regulation of nitrogen compound metabolic process [inference]

positive regulation of protein metabolic process [inference]

positive regulation of protein modification process [inference]

positive regulation of protein glycosylation [inference]

positive regulation of protein O-linked glycosylation

positive regulation of glycoprotein metabolic process [inference]

positive regulation of glycoprotein biosynthetic process [inference]

positive regulation of protein glycosylation [inference]

positive regulation of protein O-linked glycosylation

regulation of cellular metabolic process [inference]

positive regulation of cellular metabolic process [inference]

positive regulation of cellular biosynthetic process [inference]

positive regulation of macromolecule biosynthetic process [inference]

positive regulation of glycoprotein biosynthetic process [inference]

positive regulation of protein glycosylation [inference]

positive regulation of protein O-linked glycosylation

regulation of cellular biosynthetic process [inference]

regulation of macromolecule biosynthetic process [inference]

positive regulation of macromolecule biosynthetic process [inference]

positive regulation of glycoprotein biosynthetic process [inference]

positive regulation of protein glycosylation [inference]

positive regulation of protein O-linked glycosylation

regulation of glycoprotein biosynthetic process [inference]

positive regulation of glycoprotein biosynthetic process [inference]

positive regulation of protein glycosylation [inference]

positive regulation of protein O-linked glycosylation

regulation of protein glycosylation [inference]

positive regulation of protein glycosylation [inference]

positive regulation of protein O-linked glycosylation

regulation of protein O-linked glycosylation [inference]

positive regulation of protein O-linked glycosylation

positive regulation of cellular biosynthetic process [inference]

positive regulation of macromolecule biosynthetic process [inference]

positive regulation of glycoprotein biosynthetic process [inference]

positive regulation of protein glycosylation [inference]

positive regulation of protein O-linked glycosylation

regulation of nitrogen compound metabolic process [inference]

positive regulation of nitrogen compound metabolic process [inference]

positive regulation of protein metabolic process [inference]

positive regulation of protein modification process [inference]

positive regulation of protein glycosylation [inference]

positive regulation of protein O-linked glycosylation

positive regulation of glycoprotein metabolic process [inference]

positive regulation of glycoprotein biosynthetic process [inference]

positive regulation of protein glycosylation [inference]

positive regulation of protein O-linked glycosylation

regulation of protein metabolic process [inference]

regulation of protein modification process [inference]

positive regulation of protein modification process [inference]

positive regulation of protein glycosylation [inference]

positive regulation of protein O-linked glycosylation

regulation of protein glycosylation [inference]

positive regulation of protein glycosylation [inference]

positive regulation of protein O-linked glycosylation

regulation of protein O-linked glycosylation [inference]

positive regulation of protein O-linked glycosylation

positive regulation of protein metabolic process [inference]

positive regulation of protein modification process [inference]

positive regulation of protein glycosylation [inference]

positive regulation of protein O-linked glycosylation

positive regulation of glycoprotein metabolic process [inference]

positive regulation of glycoprotein biosynthetic process [inference]

positive regulation of protein glycosylation [inference]

positive regulation of protein O-linked glycosylation

regulation of glycoprotein metabolic process [inference]

regulation of glycoprotein biosynthetic process [inference]

positive regulation of glycoprotein biosynthetic process [inference]

positive regulation of protein glycosylation [inference]

positive regulation of protein O-linked glycosylation

regulation of protein glycosylation [inference]

positive regulation of protein glycosylation [inference]

positive regulation of protein O-linked glycosylation

regulation of protein O-linked glycosylation [inference]

positive regulation of protein O-linked glycosylation

positive regulation of glycoprotein metabolic process [inference]

positive regulation of glycoprotein biosynthetic process [inference]

positive regulation of protein glycosylation [inference]

positive regulation of protein O-linked glycosylation

regulation of macromolecule metabolic process [inference]

regulation of macromolecule biosynthetic process [inference]

positive regulation of macromolecule biosynthetic process [inference]

positive regulation of glycoprotein biosynthetic process [inference]

positive regulation of protein glycosylation [inference]

positive regulation of protein O-linked glycosylation

regulation of glycoprotein biosynthetic process [inference]

positive regulation of glycoprotein biosynthetic process [inference]

positive regulation of protein glycosylation [inference]

positive regulation of protein O-linked glycosylation

regulation of protein glycosylation [inference]

positive regulation of protein glycosylation [inference]

positive regulation of protein O-linked glycosylation

regulation of protein O-linked glycosylation [inference]

positive regulation of protein O-linked glycosylation

positive regulation of macromolecule metabolic process [inference]

positive regulation of macromolecule biosynthetic process [inference]

positive regulation of glycoprotein biosynthetic process [inference]

positive regulation of protein glycosylation [inference]

positive regulation of protein O-linked glycosylation

positive regulation of protein metabolic process [inference]

positive regulation of protein modification process [inference]

positive regulation of protein glycosylation [inference]

positive regulation of protein O-linked glycosylation

positive regulation of glycoprotein metabolic process [inference]

positive regulation of glycoprotein biosynthetic process [inference]

positive regulation of protein glycosylation [inference]

positive regulation of protein O-linked glycosylation

regulation of protein metabolic process [inference]

regulation of protein modification process [inference]

positive regulation of protein modification process [inference]

positive regulation of protein glycosylation [inference]

positive regulation of protein O-linked glycosylation

regulation of protein glycosylation [inference]

positive regulation of protein glycosylation [inference]

positive regulation of protein O-linked glycosylation

regulation of protein O-linked glycosylation [inference]

positive regulation of protein O-linked glycosylation

positive regulation of protein metabolic process [inference]

positive regulation of protein modification process [inference]

positive regulation of protein glycosylation [inference]

positive regulation of protein O-linked glycosylation

positive regulation of glycoprotein metabolic process [inference]

positive regulation of glycoprotein biosynthetic process [inference]

positive regulation of protein glycosylation [inference]

positive regulation of protein O-linked glycosylation

regulation of glycoprotein metabolic process [inference]

regulation of glycoprotein biosynthetic process [inference]

positive regulation of glycoprotein biosynthetic process [inference]

positive regulation of protein glycosylation [inference]

positive regulation of protein O-linked glycosylation

regulation of protein glycosylation [inference]

positive regulation of protein glycosylation [inference]

positive regulation of protein O-linked glycosylation

regulation of protein O-linked glycosylation [inference]

positive regulation of protein O-linked glycosylation

positive regulation of glycoprotein metabolic process [inference]

positive regulation of glycoprotein biosynthetic process [inference]

positive regulation of protein glycosylation [inference]

positive regulation of protein O-linked glycosylation

regulation of primary metabolic process [inference]

regulation of protein metabolic process [inference]

regulation of protein modification process [inference]

positive regulation of protein modification process [inference]

positive regulation of protein glycosylation [inference]

positive regulation of protein O-linked glycosylation

regulation of protein glycosylation [inference]

positive regulation of protein glycosylation [inference]

positive regulation of protein O-linked glycosylation

regulation of protein O-linked glycosylation [inference]

positive regulation of protein O-linked glycosylation

positive regulation of protein metabolic process [inference]

positive regulation of protein modification process [inference]

positive regulation of protein glycosylation [inference]

positive regulation of protein O-linked glycosylation

positive regulation of glycoprotein metabolic process [inference]

positive regulation of glycoprotein biosynthetic process [inference]

positive regulation of protein glycosylation [inference]

positive regulation of protein O-linked glycosylation

regulation of glycoprotein metabolic process [inference]

regulation of glycoprotein biosynthetic process [inference]

positive regulation of glycoprotein biosynthetic process [inference]

positive regulation of protein glycosylation [inference]

positive regulation of protein O-linked glycosylation

regulation of protein glycosylation [inference]

positive regulation of protein glycosylation [inference]

positive regulation of protein O-linked glycosylation

regulation of protein O-linked glycosylation [inference]

positive regulation of protein O-linked glycosylation

positive regulation of glycoprotein metabolic process [inference]

positive regulation of glycoprotein biosynthetic process [inference]

positive regulation of protein glycosylation [inference]

positive regulation of protein O-linked glycosylation

positive regulation of biological process [inference]

positive regulation of metabolic process [inference]

positive regulation of biosynthetic process [inference]

positive regulation of cellular biosynthetic process [inference]

positive regulation of macromolecule biosynthetic process [inference]

positive regulation of glycoprotein biosynthetic process [inference]

positive regulation of protein glycosylation [inference]

positive regulation of protein O-linked glycosylation

positive regulation of macromolecule metabolic process [inference]

positive regulation of macromolecule biosynthetic process [inference]

positive regulation of glycoprotein biosynthetic process [inference]

positive regulation of protein glycosylation [inference]

positive regulation of protein O-linked glycosylation

positive regulation of protein metabolic process [inference]

positive regulation of protein modification process [inference]

positive regulation of protein glycosylation [inference]

positive regulation of protein O-linked glycosylation

positive regulation of glycoprotein metabolic process [inference]

positive regulation of glycoprotein biosynthetic process [inference]

positive regulation of protein glycosylation [inference]

positive regulation of protein O-linked glycosylation

positive regulation of cellular metabolic process [inference]

positive regulation of cellular biosynthetic process [inference]

positive regulation of macromolecule biosynthetic process [inference]

positive regulation of glycoprotein biosynthetic process [inference]

positive regulation of protein glycosylation [inference]

positive regulation of protein O-linked glycosylation

positive regulation of nitrogen compound metabolic process [inference]

positive regulation of protein metabolic process [inference]

positive regulation of protein modification process [inference]

positive regulation of protein glycosylation [inference]

positive regulation of protein O-linked glycosylation

positive regulation of glycoprotein metabolic process [inference]

positive regulation of glycoprotein biosynthetic process [inference]

positive regulation of protein glycosylation [inference]

positive regulation of protein O-linked glycosylation

positive regulation of cellular process [inference]

positive regulation of cellular metabolic process [inference]

positive regulation of cellular biosynthetic process [inference]

positive regulation of macromolecule biosynthetic process [inference]

positive regulation of glycoprotein biosynthetic process [inference]

positive regulation of protein glycosylation [inference]

positive regulation of protein O-linked glycosylation

regulation of cellular process [inference]

regulation of cellular metabolic process [inference]

positive regulation of cellular metabolic process [inference]

positive regulation of cellular biosynthetic process [inference]

positive regulation of macromolecule biosynthetic process [inference]

positive regulation of glycoprotein biosynthetic process [inference]

positive regulation of protein glycosylation [inference]

positive regulation of protein O-linked glycosylation

regulation of cellular biosynthetic process [inference]

regulation of macromolecule biosynthetic process [inference]

positive regulation of macromolecule biosynthetic process [inference]

positive regulation of glycoprotein biosynthetic process [inference]

positive regulation of protein glycosylation [inference]

positive regulation of protein O-linked glycosylation

regulation of glycoprotein biosynthetic process [inference]

positive regulation of glycoprotein biosynthetic process [inference]

positive regulation of protein glycosylation [inference]

positive regulation of protein O-linked glycosylation

regulation of protein glycosylation [inference]

positive regulation of protein glycosylation [inference]

positive regulation of protein O-linked glycosylation

regulation of protein O-linked glycosylation [inference]

positive regulation of protein O-linked glycosylation

positive regulation of cellular biosynthetic process [inference]

positive regulation of macromolecule biosynthetic process [inference]

positive regulation of glycoprotein biosynthetic process [inference]

positive regulation of protein glycosylation [inference]

positive regulation of protein O-linked glycosylation

positive regulation of cellular process [inference]

positive regulation of cellular metabolic process [inference]

positive regulation of cellular biosynthetic process [inference]

positive regulation of macromolecule biosynthetic process [inference]

positive regulation of glycoprotein biosynthetic process [inference]

positive regulation of protein glycosylation [inference]

positive regulation of protein O-linked glycosylation

Displaying **all 5** entries
GO Term	Evidence Code	PMID
endoplasmic reticulum	TAS	10366449
endoplasmic reticulum membrane	IDA TAS	14699049
membrane	TAS	10366449
sarcoplasmic reticulum	IEA
acrosomal vesicle	IEA

GO Hierarchy

cellular component

cellular anatomical entity [inference]

membrane

organelle membrane [inference]

endoplasmic reticulum membrane

organelle [inference]

membrane-bounded organelle [inference]

vesicle [inference]

intracellular vesicle [inference]

cytoplasmic vesicle [inference]

secretory vesicle [inference]

secretory granule [inference]

acrosomal vesicle

intracellular membrane-bounded organelle [inference]

endoplasmic reticulum

sarcoplasmic reticulum

intracellular vesicle [inference]

cytoplasmic vesicle [inference]

secretory vesicle [inference]

secretory granule [inference]

acrosomal vesicle

intracellular organelle [inference]

intracellular membrane-bounded organelle [inference]

endoplasmic reticulum

sarcoplasmic reticulum

intracellular vesicle [inference]

cytoplasmic vesicle [inference]

secretory vesicle [inference]

secretory granule [inference]

acrosomal vesicle

Displaying **all 3** entries
GO Term	Evidence Code	PMID
dolichyl-phosphate-mannose-protein mannosyltransferase activity	IEA
mannosyltransferase activity	IMP	28512129
metal ion binding	IEA

GO Hierarchy

molecular function

catalytic activity [inference]

transferase activity [inference]

glycosyltransferase activity [inference]

hexosyltransferase activity [inference]

mannosyltransferase activity

dolichyl-phosphate-mannose-protein mannosyltransferase activity

catalytic activity, acting on a protein [inference]

dolichyl-phosphate-mannose-protein mannosyltransferase activity

binding [inference]

ion binding [inference]

cation binding [inference]

metal ion binding

Gene Ontology information from NCBI Gene and UniProt.

GlycoGene Database (GGDB)

GGDB ID

gg138

Gene Symbol

POMT1

Orthologous Gene

Displaying **all 4** entries
Species	Protein	mRNA
Saccharomyces cerevisiae	NP_010188	NC_001136.6
Rattus norvegicus	NP_445858	NM_053406
Drosophila melanogaster	NP_524025	NM_079301
Mus musculus	NP_660127	NM_145145

KEGG BRITE Database

Orthology

K00728

Name

dolichyl-phosphate-mannose-protein mannosyltransferase [EC:2.4.1.109]

References

Reactions

Displaying 1 entry
KEGG Reaction	Enzyme	Acceptor	Product
R07620	2.4.1.109	G74840NI	G61491DK

Disease

Disease Ontology

Displaying entries **81 - 90** of **148** in total

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DO ID	Disease Name	Source
DOID:1029	familial periodic paralysis	DisGeNET
DOID:10488	imperforate anus	DisGeNET
DOID:10584	retinitis pigmentosa	DisGeNET
DOID:1059	intellectual disability	DisGeNET DisGeNET
DOID:10629	microphthalmia	DisGeNET DisGeNET
DOID:1088	meningocele	DisGeNET
DOID:10907	microcephaly	DisGeNET
DOID:10908	hydrocephalus	DisGeNET DisGeNET
DOID:11105	fundus albipunctatus	DisGeNET
DOID:11211	buphthalmos	DisGeNET

The Human Phenotype Ontology

Displaying entries **51 - 60** of **192** in total

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HPO ID	HPO Term
HP:0001256	Intellectual disability, mild
HP:0001262	Excessive daytime somnolence
HP:0001263	Global developmental delay
HP:0001265	Hyporeflexia
HP:0001270	Motor delay
HP:0001272	Cerebellar atrophy
HP:0001274	Agenesis of corpus callosum
HP:0001276	Hypertonia
HP:0001284	Areflexia
HP:0001288	Gait disturbance

Displaying **all 9** entries
Disease ID	Disease Name
ORPHA:370980	muscular dystrophy-dystroglycanopathy type B5 obsolete congenital muscular dystrophy without intellectual disability
ORPHA:899	muscular dystrophy-dystroglycanopathy (congenital with brain and eye anomalies), type A, 4 muscular dystrophy-dystroglycanopathy (congenital with brain and eye anomalies), type A, 7 muscular dystrophy-dystroglycanopathy (congenital with brain and eye anomalies), type A1 muscular dystrophy-dystroglycanopathy (congenital with brain and eye anomalies), type A13 muscular dystrophy-dystroglycanopathy (congenital with brain and eye anomalies), type A2 muscular dystrophy-dystroglycanopathy (congenital with brain and eye anomalies), type A3 muscular dystrophy-dystroglycanopathy (congenital with brain and eye anomalies), type A5 muscular dystrophy-dystroglycanopathy (congenital with brain and eye anomalies), type A6 muscular dystrophy-dystroglycanopathy (congenital with brain and eye anomalies), type A9 muscular dystrophy-dystroglycanopathy (congenital with brain and eye anomalies), type a, 10 muscular dystrophy-dystroglycanopathy (congenital with brain and eye anomalies), type a, 11 muscular dystrophy-dystroglycanopathy (congenital with brain and eye anomalies), type a, 12 muscular dystrophy-dystroglycanopathy (congenital with brain and eye anomalies), type a, 8 muscular dystrophy-dystroglycanopathy, type A
ORPHA:370968	congenital muscular dystrophy with intellectual disability muscular dystrophy-dystroglycanopathy (congenital with intellectual disability), type B1 muscular dystrophy-dystroglycanopathy (congenital with intellectual disability), type B14 muscular dystrophy-dystroglycanopathy (congenital with intellectual disability), type B2 muscular dystrophy-dystroglycanopathy type B5 muscular dystrophy-dystroglycanopathy type B6
OMIM:236670	muscular dystrophy-dystroglycanopathy (congenital with brain and eye anomalies), type A1
ORPHA:86812	autosomal recessive limb-girdle muscular dystrophy type 2K
OMIM:613155	muscular dystrophy-dystroglycanopathy (congenital with intellectual disability), type B1
ORPHA:370959	muscular dystrophy-dystroglycanopathy (congenital with intellectual disability), type B1 muscular dystrophy-dystroglycanopathy (congenital with intellectual disability), type B14 muscular dystrophy-dystroglycanopathy (congenital with intellectual disability), type B2 muscular dystrophy-dystroglycanopathy type B5 obsolete congenital muscular dystrophy with cerebellar involvement
OMIM:609308	autosomal recessive limb-girdle muscular dystrophy type 2K
ORPHA:588	muscle-eye-brain disease muscular dystrophy-dystroglycanopathy (congenital with brain and eye anomalies), type A1

PubChem Disease

GHR Health Conditions

MedGen Diseases

OMIM Phenotypes

KEGG Diseases

Gene-Disease-Co-Occurrences-in-Literature (PubChem)

Ortholog

Displaying entries **81 - 85** of 85 in total

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Species	Gene ID	Alliance of Genome Resources	Orthologous MAtrix
Saccharomyces cerevisiae S288C	853608	SGD:S000003904
Cyprinus carpio carpio	109067947		CYPCA17863
Nannospalax galili	103727607		NANGA03940
Corvus moneduloides	116454328		CORMO10549
Strigops habroptila	115616997		STRHB17901

GlyTouCan

GlyComb

GlycoPOST

UniCarb-DR

All Resources

Other Information

Tools

Search Tools

Summary

External Links

Annotation

GlycoGene Database (GGDB)

KEGG BRITE Database

PubChem Disease

International Collaboration

Acknowledgements